| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2489 |
|---|
| Symbol | |
|---|
| ID | 4484159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3175172 |
|---|
| End bp | 3175564 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639723237 |
|---|
| Product | hydrogenase nickel insertion protein HypA |
|---|
| Protein accession | YP_866395 |
|---|
| Protein GI | 117925778 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
|---|
| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.229485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAGC TCTCTCTCTG TTACGGATTG TTGGACCAAG TGGAGCGGGT CGCCCGCGAG
AATCAAGCCA ACCGGGTGAT CCGCATTGTG CTCCAGATTG GCCCCTTGAG TGGGGCTGAG
CCTGAGCTGA TCCGTGCGGC TTTTAGCGTG GCGGCGGCGG GCAGTGTGGC TGAGGGGGCT
GAACTGGTGA CGGAGCGGGC AGCGGTGGTG GTGGTGTGCC ATAGCTGCGG TGCCCAGGGT
GAGGTGCCTG CCAACCGCCT GCTCTGCCCC GCGTGTGGTG GATGGCAGAC GCGGGTGGCC
AGTGGTGATG AATTGATCAT GTCCTCTTTA GAGCTAGAGC GGGAGGATAC CCCCTGTGCA
ACGGCGGCAA CAACCAGACA AGGTGAAGCT TAA
|
|---|
| Protein sequence | MHELSLCYGL LDQVERVARE NQANRVIRIV LQIGPLSGAE PELIRAAFSV AAAGSVAEGA
ELVTERAAVV VVCHSCGAQG EVPANRLLCP ACGGWQTRVA SGDELIMSSL ELEREDTPCA
TAATTRQGEA
|
|---|
| |