Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2479 |
Symbol | |
ID | 4483727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3157903 |
End bp | 3159042 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639723227 |
Product | hypothetical protein |
Protein accession | YP_866385 |
Protein GI | 117925768 |
COG category | [S] Function unknown |
COG ID | [COG3287] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.492023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAGA AGAGAGCGTT GCAGGTCAAG CGTGGCAGTT CTCAAGCCCG TGACCCCGCC CAAGCCGTGA ATGAGCTTGT TGAGCAGATT CAGCAGGATG GTGCGGTTTT GACCCTGCTG TTTGTCTCTC CTAGCTACGA CAAAGCCGCG CTGCAAACGG CCCTTGAGGG GGTATTTGGC GGTGTTGTGG TGGGCTGCAC CACGGCGGGT GAGATCACCC AAGCCGGTTT TGTTGAGCAG AGCCTTACCG GGGTGAGTTT GGCGGGCAAC GCCTTGCAAG CATGGGCACA TGTGATCCAG GATCTGCACC ATTTTAACCC TGCCCAGGCC CAGCAGTTGG GCGATCTTTT GCACGACGCT TTGCCCAATG AGGCAGAGCT CGACCCCGAC CACGCCTTTG CCCTGCTGCT GGTGGATGGC CTGAGCATGC GCGAGGAGCA GTTGCTGGCA CTGCTGCACC CACATCTGGA TGGCATTGCG CTGGTTGGGG GCTCTGCCGG GGATGGTTTA GCCTTTCAGG AGAGCTTTGT CTATGCCCAG GGCCGTTGGC ATCATCACGC TGCGGTGCTC ACCCTGGTCC ATTGCGAAAC CCCCTTTATG CCCTTTCAAT GGCACCATTT TAAACCCACC GCCACACGCC TAATTATTAC CGCCTGCGAC CCGATGGGGC GCCGCGTCAC GGAGATCAAC GGTCTCCCGG CCAGTCAAGC CTATGCCACG GCGGTGGGGG TACCCGAAGC GGCTCTAAAC AGTGACATCT TTAGCCGCCA CCCCACCATG TTGCAGATGG GTGGTAGCCA TTATGTGCGG GCCATTCAGC AGGCCAATGG GGATGGCTCT TTAACCTTTT ACAGCGCGGT CGAGCGGGGT TTGGTGCTGC ATTTGGCGCA GGCCGCAGAT ATGGTCAAAC ACTTGGAGCA GCAGCTACAC CTGATGCACG CTGAAATGGC CAACCCCCAG TTGGTGTTGA TTTGCGACTG CATCTTGCGC CGGTTAGAGG CCAAACAGAA AGGGGTCTTA CCCCAGCTCA GCCAACTATT GGCGCACCAT CCTGTGATAG GTTTTTCTAC TTATGGCGAA CAGAGTGGCG GCATCCATAT CAACCAGACC ATGACTGGCA TTGTATTGGG GGGGGCGTAA
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Protein sequence | MPKKRALQVK RGSSQARDPA QAVNELVEQI QQDGAVLTLL FVSPSYDKAA LQTALEGVFG GVVVGCTTAG EITQAGFVEQ SLTGVSLAGN ALQAWAHVIQ DLHHFNPAQA QQLGDLLHDA LPNEAELDPD HAFALLLVDG LSMREEQLLA LLHPHLDGIA LVGGSAGDGL AFQESFVYAQ GRWHHHAAVL TLVHCETPFM PFQWHHFKPT ATRLIITACD PMGRRVTEIN GLPASQAYAT AVGVPEAALN SDIFSRHPTM LQMGGSHYVR AIQQANGDGS LTFYSAVERG LVLHLAQAAD MVKHLEQQLH LMHAEMANPQ LVLICDCILR RLEAKQKGVL PQLSQLLAHH PVIGFSTYGE QSGGIHINQT MTGIVLGGA
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