Gene Mmc1_2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2467 
Symbol 
ID4483715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3147217 
End bp3147990 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content55% 
IMG OID639723215 
Productexodeoxyribonuclease III 
Protein accessionYP_866373 
Protein GI117925756 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.184552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTG CCACCTGGAA CGTAAACTCC ATGAATGTGC GTCAGGAGCA CGTGGCCCAA 
TGGCTGGCCG AGGATCCCTG TGATCTGCTC TGCCTGCAAG AGCTTAAAAT GGTCAGCGAA
AAATTTCCCG CTGAACGGTT TAAGTCGCTG GGCTGGCACC TGCTCGCCAA TGGCCAAAAA
ACCTATAATG GTGTGGCGGT GCTGAGTCGT TTTCCCTTAG AAGAGCGTGA TGTGGTGCTG
GATTTGCCGG GTGTTGATCC CGCGCAAAAA CGGTTGATGG CCGTCACCGT CAATGGCGTG
CGGGTGGTTA ACTGTTACGT GCCTAATGGC TCAGAAGTTG GCAGCGACAA GTACCACTAT
AAGCTGGATT GGCTGGCTAA GCTCCAGTCG TTTGTGCAGG CGCAGCTGGC GAGCTATCCC
CAATTGGTGG TGTTGGGGGA TTATAATATT GCCCCAGACG ACCGGGATGT TCACGATGTG
TCGTTTTGGG CAGGTAAAAT TTTGGTCTCT CCCCCTGAAC GGTCTGCCTA TCAGGCACTA
TGCGGGTTGG GTTTGACCGA TGCCTTTCGC CATCTACAGC CGGAGGGTGG CTATTTTAGC
TGGTGGGACT ATCGGCTGGG CTCTTTTCAG CGCAATATGG GGGTGCGTAT TGACCACCTG
CTGAGCAGCC CGGCGTTGAC GGCCAAGCTC ACCCATTGCC ACATTGATCG TGAGCCCCGT
GGCTGGGAAC GTCCCTCGGA CCATGCGCCT GTTATTGCTA CCTATCTGCT GTGA
 
Protein sequence
MRIATWNVNS MNVRQEHVAQ WLAEDPCDLL CLQELKMVSE KFPAERFKSL GWHLLANGQK 
TYNGVAVLSR FPLEERDVVL DLPGVDPAQK RLMAVTVNGV RVVNCYVPNG SEVGSDKYHY
KLDWLAKLQS FVQAQLASYP QLVVLGDYNI APDDRDVHDV SFWAGKILVS PPERSAYQAL
CGLGLTDAFR HLQPEGGYFS WWDYRLGSFQ RNMGVRIDHL LSSPALTAKL THCHIDREPR
GWERPSDHAP VIATYLL