| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2464 |
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| Symbol | |
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| ID | 4481911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3144062 |
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| End bp | 3145390 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639723212 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_866370 |
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| Protein GI | 117925753 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.329237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTGGCAC TCTGCTGCGC CCTACCGACC CAGGCCGCCG AGCAGCCACC CATGCCCAGT
GTGGCATCCG CAAAAGCGCC CGATCTCTAC GCCCTAACCG AAAAAGTGGC CGATGAGTTG
GGCTTGGACC GTCAGCTTCT CAAAGCACTG GTCATGACCG AATCGGCTTA TGATCCCAAC
ACGGTTTCCA AAACCGGTGC CGTTGGGCTT ATGCAACTGA TGCCCCTCAC GGCCAAAGAT
ATGGGGGTTA CAGATTCGTT TGATCCTGAA CAAAATCTGC GCGGCGGGGC CACCTATCTA
AAAATGTTAA TCAACCGCTT TGACAGCTTG GTGCTGGCCC TGGCCGCCTA TAATGCCGGT
CCGGGTAATG TGGAGCGGTA TGGCACCATT CCACCCTTTG CGCAGACCCG TCGCTATGTA
CAAAAGGTTT TGACCCACTA CGGAAAATTC CGCAAAAACG AACTGGAACT GGCCCGCAAA
AATGGTAACC AAGCCCTCGG CAGCTGGGAT TTGGCCTTGG CGGATCTGGC CGTACTCTCC
CGCGAGATTG AGCGCATGGA CAAGCTAAGC CGTGCGCAAG CCAAGACCGC CCATACCCAA
ACCGCTCCAT CCACCGATTG GCAGCGTCCC ATCGCCAACC CCGAACCCCC CAGCTATCCA
GCAGCCTCCC AGCCGTTGGC CTTGGCGGAT GGGTTGGTCA CCTTTCAAAA GATGGACGGT
CCTGGGCAGC GCCACATTAA AATAGACCTG CACCCTACAC CCAACGAGGA TCGTGAGGAT
AGCCGGGCTG AACAGATTGC TCAGGCTCGG GCACGCATCG AAGCGCGCCG TGCTCAGGCC
GAAACAGCCC GTCAAGAGGC ACTCTTAAAA CGCAAACAGC AGATCGAAGC GCTGGAGGCC
CGCCGAGCCC AGACCGAAGC CCTCCGCCAA GCCAACCGTG AGCGGGCCAA ACGGCTGGCG
ATGGAAGCCA AAAAAAGAGC CCTTGAAGCG GCCCAGCAAC AGCTCGCCCG GGCCGACGAT
GAACCAGCCC GTGATGGCAT TAAACTCTCT GCGCCTGCGG TTCGCCACGC CACCCCTTTA
ACCCTCGGCA CCACCGACAG CGGAGAACAA ACCCTGCGCA GCTACCGCAA ACCGGATGGC
ACCTTGGTCT TTACCACCCA GCCCCCCACG GCTGAAGAGC AGCAACAGAG CCGTGCCCAG
CCGGTCAAAC AACCCTCTGT CAAACCCGCG CCCACCAATG GACGCACTTT GGAGGAGTAC
AGCCGGCGGC AGCGCAACCC CAGCATGCCC AGTAAGCGGG ATGGTATTCG TATTCGCGGG
GCCAGCTAA
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| Protein sequence | MLALCCALPT QAAEQPPMPS VASAKAPDLY ALTEKVADEL GLDRQLLKAL VMTESAYDPN
TVSKTGAVGL MQLMPLTAKD MGVTDSFDPE QNLRGGATYL KMLINRFDSL VLALAAYNAG
PGNVERYGTI PPFAQTRRYV QKVLTHYGKF RKNELELARK NGNQALGSWD LALADLAVLS
REIERMDKLS RAQAKTAHTQ TAPSTDWQRP IANPEPPSYP AASQPLALAD GLVTFQKMDG
PGQRHIKIDL HPTPNEDRED SRAEQIAQAR ARIEARRAQA ETARQEALLK RKQQIEALEA
RRAQTEALRQ ANRERAKRLA MEAKKRALEA AQQQLARADD EPARDGIKLS APAVRHATPL
TLGTTDSGEQ TLRSYRKPDG TLVFTTQPPT AEEQQQSRAQ PVKQPSVKPA PTNGRTLEEY
SRRQRNPSMP SKRDGIRIRG AS
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