Gene Mmc1_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2462 
Symbol 
ID4481909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3142665 
End bp3143099 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content52% 
IMG OID639723210 
ProductSSU ribosomal protein S6P 
Protein accessionYP_866368 
Protein GI117925751 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.309208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATTCT ATGAGAGTAT CTACATCCTC AGGGCTGACC TGACCACCGA ACAAGTGGAA 
CTGGTCAATA AACGGTTTTC CGACAACGTT GCAGCGACAG GCGGTAAGGT GGTACGTACC
GAACTGTGGG GCCGTCGTCA GTTGGCCTAT TTGGTTAAGA AAAACGTCAA GGGTTTTTAT
GTCTTCCATA TCCTGGAAGG CGAAGGCTCC ATGGTGCATG ATCTGGAAGC TAAATTGGGC
ATTGATGAAG ACGTGCTCAA GTTCCAGCAT GTGCGCATCG AAGACGTCAG CGATAAAGCC
TCTCCTTTAG CCCCCTGTGA AGAAAAGGGT GAAGAGGGTA AAGCCGAAGA CGCCGCCGAT
GAGCTTACCA CCTTCGGTAT GGCCGATGAC GACGACCTTG GCGATGATGA CGATACCGTT
GAGGCGGGCA TCTAA
 
Protein sequence
MAFYESIYIL RADLTTEQVE LVNKRFSDNV AATGGKVVRT ELWGRRQLAY LVKKNVKGFY 
VFHILEGEGS MVHDLEAKLG IDEDVLKFQH VRIEDVSDKA SPLAPCEEKG EEGKAEDAAD
ELTTFGMADD DDLGDDDDTV EAGI