Gene Mmc1_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2447 
Symbol 
ID4482969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3118831 
End bp3119889 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content54% 
IMG OID639723195 
Productglycosyl transferase family protein 
Protein accessionYP_866353 
Protein GI117925736 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCT CTCCAGTGGT AGCGATATTG ATGCCAAACT TTAACGGTGC CACCTACATC 
GCCGAAACCC TGGACTCACT ACTGGCACAA CAGTTTACCC AGTGGCAGTG CATGATTGTG
GATGATGGCT CCAGCGACAA CTCACCAGAG ATTATCCAAG CCTATGCCCA GCGCGACCCG
CGCATTGGTT TTATGCATCG TCAGCGCCAG CCCAAAGGGG CCTGCACCTG CCGTAATATT
GGCCTAGACC ACACCACCGC CCCTTATGTG ATGTTTTTGG ATACAGACGA TCTGTTAGAG
CCCTTTGCCC TGCAAAACCG GGTAGCCACT CTGCGCGCCA GACCTGACCT GGATTTTGCC
ATTTTCCCCT CCTTAATGTT CACCCACAAA CCCCATGATC TACGTCTGTG GTGGAGTATC
CCCAACGACC AAGACCTGCT CACACGACAG TGTTTTGGCG ATGCAGTCTG CCAGGGCACA
GGGCCGCTTT TTACCCGTAG CGCCTTTGAT CGCATGGGCC GTTGGGACGA AGCGTTAATG
CTGTGGCAAG ATATCGACCT CTTCTTCCGT GCCTACAGCC AGGATTATCG CTATGAAATA
TTTTGGGATC TCCCCCCCGA CCTACACAAT CGCCGCAACC CCAACAGTTT GAGTCGCTCT
AATTTTTTTC AACCCGCCAA ACAACTCAGC CGTCAATTGG TGATGGAGCG CGCGATCAAT
CTGATGCACA CCCACAACAA ACACCCCTAT CTGCCCAAGC TCGCACCCAA AACAGCCGAG
GTTATCGTCG GCCTACAACG GGCCAATGCC GCAACCGAAG CCCAAGCCTT ACGCCACTTT
GCCCTAGAGA AAGGCGTGCT CAGCCCGGTG CAATATCGAC GCATTGGCCT CATCACCCGT
CTCTGGCAGA TGCGGCTCTA TCGCCTGCCG GGTGGGCTTA ACCTCATAAA AAAACTCTCT
CAAACCTTTT CCTTAGCGCA ACCGTCACGT ATGTGCACCG TCAGCTATGA TGAATACCCC
TGCCCAACAG CCCCAGAAAA GCCACCGCTC TTTTCATAA
 
Protein sequence
MHTSPVVAIL MPNFNGATYI AETLDSLLAQ QFTQWQCMIV DDGSSDNSPE IIQAYAQRDP 
RIGFMHRQRQ PKGACTCRNI GLDHTTAPYV MFLDTDDLLE PFALQNRVAT LRARPDLDFA
IFPSLMFTHK PHDLRLWWSI PNDQDLLTRQ CFGDAVCQGT GPLFTRSAFD RMGRWDEALM
LWQDIDLFFR AYSQDYRYEI FWDLPPDLHN RRNPNSLSRS NFFQPAKQLS RQLVMERAIN
LMHTHNKHPY LPKLAPKTAE VIVGLQRANA ATEAQALRHF ALEKGVLSPV QYRRIGLITR
LWQMRLYRLP GGLNLIKKLS QTFSLAQPSR MCTVSYDEYP CPTAPEKPPL FS