Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2419 |
Symbol | |
ID | 4480983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3086612 |
End bp | 3088363 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639723167 |
Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
Protein accession | YP_866325 |
Protein GI | 117925708 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.736336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTCAAG ATACCCAACT CATCCGCCGT CTGCTGCGCT TGATCTGGCC GTTCCGTTGG TATGTCATTA CCGCACTGCT CTGTATGGGG GTGATGGCGG CTACCAATGG GGCCATCGCC TTTATGGTCA AACCGCTGGT GGATGACGTC TTTATGCAGA AAGACGCCTC CCTCGTTACC CTTATTCCCA TTGTGGTTAT GGGTATTTTT ATCGTGCGGG CGGTGGTCTT TTTTCTGCAA TCCTATCTGA TGCAGAGCTT GGGCTTTAAG ATTGTGCGGC TGTTGCAGGT GCGGCTCTAC AAAAAGATTC TGCATTTGGA TATGGAGCGT TTTAATACCG AATCCACCGG TAGTTTTATC TCTCGCATGA TCTTTGATAT TGATCAGCTC AAGCGGGTGG TCTCCACCGC CTTGGCCGAT ATTACCCGGG AGCTGTTGAC GGTCACTTTT CTGTTTGGGG TGGTGGTCTA TCGCGCCGCA GAGCTGGCCT GGGTCTCGGT GGTTGGGGTG CCTTTAGCGG TCTATCTGAT CTACCTGTTC GGGCGAAAAA TGCGCACCAT CAGCCGCCGC CAACAAGAGC TGATGGAGGA TGTCACCAGC CATCTGGAGG AGACCATCGC CGGGGTTAAG GTGGTCAAAG CCTACTGTAT GGAGGGCTAT GAACATGGGG TGTTTCGGCG TATTAGCCAG CGGGTATTAA AAAACAACCT GCGCTCAGCC TTTATCAACG CCATCTCCAA GCCCTCCATT GATCTGGTGG CGGGTATTGC CATCTCGCTG GTGGTGTTGA CCTCGGCCCA TGCCATTTTG GATGGTAAAA CCACCCCTGG TACGCTCTTT TCGTTCCTTA CCGCGCTCAT GATGGCTTAC AGTCCATTGA AGCGTATTAC GATGCTCTAT AATGGGTTAC AAGCGGGATT GGCGGCGGCG CAACGGGTGT TTGAGCGGCT GGATCAATAT CCTGCCATTC AAAATGTGCC GGAGGCCGGT AAGCTGCAAC CCCTTACCAA AGCGCTGCGT TTTGAAAATA TTGGCTTTCG TTATCAGAGC AGCGAGGGGC CGGTGCTGCG AGGCATCAAC CTACACATTG GGGTGGGCGA AAAGGTTGCG CTGGTTGGTC AAAGCGGGTG TGGTAAAAGC ACCCTGGCCA ATCTGGTGCC GCGCTTTTAT GAGCCGCAGC AGGGGGCGAT TCTGTTTGAT GGGGTCGATA TTCGCAGTGT GACCATGCGC TCTTTACGCC AGCAGATTGC CATGGTGACC CAGGAGAATG TGCTGTTTAA CGATACCATC CGCAACAATG TGGCCTATGG CAAGCTCAGA GCCAGCGATG AGGAGATCTG GGCAGCCCTG GAGGCGGCCA ATGCCAAGAG CTTTGTGGAG CAGTTACCCG AGGGGCTGGA TGCCATGATC GGCAATAAGG GGGCCAAGCT TTCGGGTGGG CAGCGGCAAC GCATTGCCAT TGCCCGCGCC CTGCTCAAAT CGGCCTCTGT GTTGATTTTG GACGAAGCAA CCAGCGCCTT GGATAGCGAG AGTGAACAGT TGGTGCAAGA GGCGCTGGAT CGTCTGATGG ACCGCTACAC CACGCTGGTG ATTGCCCATC GTCTATCCAC CATTCGCAAT GCCGACCGCA TTGTGGTGAT GCATGAAGGG GCGGTGGCGG AGATGGGCAC CCATGATAGC TTGCTGGCGC AGGGGGGCCT CTATGCCAAA CTCTGTGAGA TTCAATTTGA TACCCAAACG GCGAAAGAGT AA
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Protein sequence | MVQDTQLIRR LLRLIWPFRW YVITALLCMG VMAATNGAIA FMVKPLVDDV FMQKDASLVT LIPIVVMGIF IVRAVVFFLQ SYLMQSLGFK IVRLLQVRLY KKILHLDMER FNTESTGSFI SRMIFDIDQL KRVVSTALAD ITRELLTVTF LFGVVVYRAA ELAWVSVVGV PLAVYLIYLF GRKMRTISRR QQELMEDVTS HLEETIAGVK VVKAYCMEGY EHGVFRRISQ RVLKNNLRSA FINAISKPSI DLVAGIAISL VVLTSAHAIL DGKTTPGTLF SFLTALMMAY SPLKRITMLY NGLQAGLAAA QRVFERLDQY PAIQNVPEAG KLQPLTKALR FENIGFRYQS SEGPVLRGIN LHIGVGEKVA LVGQSGCGKS TLANLVPRFY EPQQGAILFD GVDIRSVTMR SLRQQIAMVT QENVLFNDTI RNNVAYGKLR ASDEEIWAAL EAANAKSFVE QLPEGLDAMI GNKGAKLSGG QRQRIAIARA LLKSASVLIL DEATSALDSE SEQLVQEALD RLMDRYTTLV IAHRLSTIRN ADRIVVMHEG AVAEMGTHDS LLAQGGLYAK LCEIQFDTQT AKE
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