Gene Mmc1_2351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2351 
Symbol 
ID4482050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2986248 
End bp2986754 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content51% 
IMG OID639723099 
Producthypothetical protein 
Protein accessionYP_866257 
Protein GI117925640 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5456] Predicted integral membrane protein linked to a cation pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000235101 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATA CAGAAGAGAA ACTACCCTGG TATGCTGGGG GTTGGCCCTG GGCCATAGCT 
GGTGTGGTGA TGGCCGTTGC GGTTATTGGC GTCAACTTTT ACATGTGGTA CTCTGGTAGC
CAAAGCGCAA CCGGGTTGGT CATCGAGGGG CGCTTTAAAA AGGGTATGAC CTACGACAAA
GAGATGGAGC AGTATAAAAA CCAGGTGGCG TTGGGTTGGA AAATTACCCA GGATAGCAGC
CAGTTGATGC TCAATCAGGA GCGCCCCCTG ACCATCACTG TGTTGGATAA AACGGATCAA
CCCATCCAGG GGGCTCACGT TCAGGGTTCG CTCATACGTC CGATTGGGGC TGGCAGTGAT
GTGAATTTCA TGCTGGCAGA GTCTAGCCCA GGGGTATATG TTGGTCTGGT TACGCCCCAT
CTCATCGGCT CTTGGTATGT TCAAGCGACC ATTACACGGG GTGACGAATT GTATGTCTAT
AAAAAGAGAA TTCAAGTGGT GCGCTAA
 
Protein sequence
MSHTEEKLPW YAGGWPWAIA GVVMAVAVIG VNFYMWYSGS QSATGLVIEG RFKKGMTYDK 
EMEQYKNQVA LGWKITQDSS QLMLNQERPL TITVLDKTDQ PIQGAHVQGS LIRPIGAGSD
VNFMLAESSP GVYVGLVTPH LIGSWYVQAT ITRGDELYVY KKRIQVVR