Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2321 |
Symbol | |
ID | 4482777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2952409 |
End bp | 2954997 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639723069 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_866227 |
Protein GI | 117925610 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.10527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.723891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGAAA ATCATACAGA CAAGAGTGCA CCGACAAAAG GTGCGGCGAA ACCAAAACGT AAATCCCGTT GGATATGGCG CTGGTTTAAG CGTCTCTTTG TGCTGGGGCT GTTACTGACC CTGGGCGGGG GGATCTATGG TTGGTCCATC TATCTTAAAT TTTCCCGCGA TCTGCCCTCG CTGCGCAGCT TGCAGGATTA TCACCCTTCA TTGGTAACGC GGGTCTATGC GCGGGACTAT CGTTTGATGG GCGAGTTCTA CATTGAACGA CGCAAATTTA TTCCCATCAA AGATGTTCCC CCCATGCTGG TCAACGCCTT CCTCGCCACG GAGGACGCCC GCTTTTACAG CCATTTTGGC TTAGACCCCG TGGGCATCCT ACGCGCCTTT ATCACCAACG CCATCGCTGG ACGGGTGGTG CAAGGGGCCT CGACCATCAC CCAACAGGTG GCCAAAACCT TTCTGCTCAC CGCCGAGCGA AGCTATACCC GCAAAATTAA AGAGGCCATC CTTGCCCTGC GCATCGAAGA GACCCTCACT AAAGAGGAGA TCTTGGAGCT CTACATCAAC CAGATCTATC TGGGGGCCGG GGCCTATGGG GTTGGCTCGG CTGCACGCAT CTACTTTAAT AAAGATGTTT CAGAGTTAAG CATTGCCCAG ATGGCGATGC TGGCCGCGCT GCCCAAAGCG CCCTCTCGCT ACTCGCCATG GAACTATGAA AAGCGCGCTA AAACCCGTCA ATTGGTGATC TTGCAGCGCA TGTTTGACGT GGGCCAAATC ACCCGTGAAC AGGCCATTGA AGAGGCCGCC CGCCCCCTGG AGTTAGCCCG CCCCCAGGTG CCCCTGGAAC AGGTTGCACC CCACTATCTG GAACATGTAC GGCGCACCCT GTTAGAAGAG TGGGGCTCTA GCCGTCTCTA CCGGGGTGGG CTGGATGTCT ACACCACCCT GGACCCAACC CTACAGGTGG CCGCCCAACA AGCCGTGCGG GATGGGCTGG TGGCCTATAG CCAGCGGCAT GGTTATATGG GCCCTATGGG CAAACTGGAG AGTGTGGATA AAGCCAGCCT CGCTAAATGG CTGGAGCAGG TGGAAAAAGA TCCGGTCACC ACGCAAGGTT TTGTGAAGGC CGTGGTGTTG GAGGTTCCCC CTCAGGGGGC GGCCAAAATC ATGCTCGCCA AGGGGCACAC TTTTGATTTA CCTTTCTCCG CTGTCGCTTG GGCCAGACCC CGCACGGAAA AGGATTTAAT GCCCGGCAAA GCCATTGATA AAATAAGCGC TATTTTATCA CCTGGTGACA TCATTTTGGT GGATCTTAAA CCGGCGTTAA CCCCCAATGC CAAAGGGGAT CTGGAGCCCG GCCATCAGGC TATTTTAGCG CAGGAGCCCG ATGCCGAAGC CGCCCTCATC AGCATGGACC CCAACACCGG GCAAATTATC GCCATGGTGG GGGGGTATGA CTATTCCAAC AGTGAGTATA ACCGCGCCAC CCAATCCAAA CGGTTGCCCG GTTCGGCCTT TAAACCGTTC ATTTATGCTG CGGCTCTCAG CCAGGGTTAC ACCCCGGCCA GCCGCATTGA TGATGCACCC ATCCCCATTG TCTATCGCGA TAGTGTGACC GGCGAGCGCA AGATCTGGAA AGCGGAAAAC TATGAACGCC GCTTCTACGG CCCAACCACG CTGCGGGTAG CGTTAGAACA TTCACGCAAC TTGGTGACCA TCCGCCTCCT AAAAAACCTG GGTGTGCGGC AGGTGGTGCC TTTTGTGGAA AAATTTGGTC TGGATATTCC TGAAGCCCGT CAAGATCTCT CCATCGCTCT GGGCACCATG AACTATTCAC CCATGGAGAT GGCCCAAGCC TATGCAGCCT TTCCCAATGG CGGTAAGTTG GTGGAGCCGG TCTATATAGC ACGGGTGCAA GACCGTTATG GACGCACCAT TTTTCGCCAT CGTAGCGGCG ACTGCCAGCT CTGCCATAAA GAGACCGAAC GTTCCATCAC CAACATGTTA GAGGGGCGGG ATAAAGATCT GCCCAAGGGC CACGAAAATA TGTTTGGAGA ACAGGTTATG GAGCCCCAGG TAGCCTATCA GATCACCAAC ATGCTCAAGG GCGTCATTAC CCATGGCACC GGCCAAAAGG CGCGGGTTAT CAACCGTCCC TTGGCGGGTA AAACCGGCAC CACCAACGAT CTGCGGGACG CTTGGTTCCT TGGCTTTAGC CCCTCCTTAG TCACCTCGGT ATGGGTAGGT CGAGATGACT ATGCTACCCT GGGTTATAAA GAGACCGGTG CCCGTGCGGC GTTGCCAATC TGGATCGACT ATATGCAAGA GGCACTCAAA GACCGCCCCA TTGTGGATTT CCCCGTACCT CCCGGCATCT ATTTAGAGTC GGTGGATGGC GACAGTGGCG GCCCCGTGAC CGATGCCACC AAGCGGGTGG TGCTGGAAGC GTTTAAACCT GAAGATCGTC AGGTTCGCGC TCAAGAGATG CGTCAATTTA ACCCCAATGG GCGCAGCGAC CCCATGCAGC AAGGCAGCCC TATGGGCAGC GCCACCGATG GCGGTTCCAT TCCCTCTGGG CTTTACTAA
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Protein sequence | MPENHTDKSA PTKGAAKPKR KSRWIWRWFK RLFVLGLLLT LGGGIYGWSI YLKFSRDLPS LRSLQDYHPS LVTRVYARDY RLMGEFYIER RKFIPIKDVP PMLVNAFLAT EDARFYSHFG LDPVGILRAF ITNAIAGRVV QGASTITQQV AKTFLLTAER SYTRKIKEAI LALRIEETLT KEEILELYIN QIYLGAGAYG VGSAARIYFN KDVSELSIAQ MAMLAALPKA PSRYSPWNYE KRAKTRQLVI LQRMFDVGQI TREQAIEEAA RPLELARPQV PLEQVAPHYL EHVRRTLLEE WGSSRLYRGG LDVYTTLDPT LQVAAQQAVR DGLVAYSQRH GYMGPMGKLE SVDKASLAKW LEQVEKDPVT TQGFVKAVVL EVPPQGAAKI MLAKGHTFDL PFSAVAWARP RTEKDLMPGK AIDKISAILS PGDIILVDLK PALTPNAKGD LEPGHQAILA QEPDAEAALI SMDPNTGQII AMVGGYDYSN SEYNRATQSK RLPGSAFKPF IYAAALSQGY TPASRIDDAP IPIVYRDSVT GERKIWKAEN YERRFYGPTT LRVALEHSRN LVTIRLLKNL GVRQVVPFVE KFGLDIPEAR QDLSIALGTM NYSPMEMAQA YAAFPNGGKL VEPVYIARVQ DRYGRTIFRH RSGDCQLCHK ETERSITNML EGRDKDLPKG HENMFGEQVM EPQVAYQITN MLKGVITHGT GQKARVINRP LAGKTGTTND LRDAWFLGFS PSLVTSVWVG RDDYATLGYK ETGARAALPI WIDYMQEALK DRPIVDFPVP PGIYLESVDG DSGGPVTDAT KRVVLEAFKP EDRQVRAQEM RQFNPNGRSD PMQQGSPMGS ATDGGSIPSG LY
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