Gene Mmc1_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2239 
Symbol 
ID4480581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2855809 
End bp2857737 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content52% 
IMG OID639722988 
Productferric reductase domain-containing protein 
Protein accessionYP_866146 
Protein GI117925529 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0544393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCTC TATCCCGCAG CTTCCGTACG GAACACATCC TCTACATGCT CTCGGTCATG 
AGCACACTGG CGATTGCCTT GGCTGTGGGG GTGCAACCGC TGTTTCTGGA TGAGGTGCTC
AAAATTCCTT TTGAAAAAGC CGGTACCATC AATGCCCACT TAACCGTTGT TACCGAGATG
ATAAGCCTGT TTGTGGTCGG TTATACCGGC TTTCGCTATG GCCGGACATT CCGAGCACAG
CTCATTTTTT ATGGATTTCT CTGTATCCTA ATCGGCTCGC TGTTGGCACC GTGGAGTGGC
CGTTTACAGA TCGCCATAGG AGTCGGTGGA CTGGCTTTCT ACTACCTTAT GCGTACACTT
ATCTCAATCG GCACCAACAC CGTGCAGATG GAAACCACCA CCTGGATGGG CGATGTTTCA
GTTCACGATC ACAAACCTAA GCTAATGCTT GGGGTGATTT CCATGATGGT CTTGGGCTCA
ACCATCCTCT ACAGCATCAT CATCCAGATC CCCCACGACA CCGGTACGGT CAACTTTGTG
CTGGCCCTGC CAATTTTAGT CGGTTTAGCC GGAGCGCTCT TAACCCGCTA TAACCTACAC
AAAACCACAC GCCCGGGCAC GGAGCTAAAA GAGCGCCCCT ATGATCGAAT CTGGTCCTTG
GTCACTGGCG ATGCCCGGAT GCAGCTCTGT TTTGCCGCAT CGTTCTATAC CCGTGCCGAC
ATGATCGTGG TAAGCCTATT TCTCTCTCTA TGGCTTAACT CCATGGCCGA TATGGTGGGG
GCCTCGCGGC TTTATGCCAC CGCCCACGCG GCTGGCTTAA TGGGGGTAGT GGGGGCTTCT
ACCCTGATCT CGATCCCGGT GTGGATCCGC TTTATGGAGC ACCATAGCCG GGTGGCGGCC
ATTGGCGCGG CGCTGGCTCT CTCGGGCCTT GGTTTTGTTA TGCTGGCTTT TGTGGTCAAC
CCCTTTCAAT GGATCGTGGT GCTCCCCTTA ATTGTCATCG GCATGGGCAG TGGTGGTGCT
CTGATCGCGC CTAAAGTATT GGCCAACGAT CTTGCCCCAA AAGATATTCT TGGCCCACTC
CAGGGGCTCT TTTTCCTGAC GGGCGGCATC GGCCTGGTGC TGATGGTGCA AAGTGGTGGT
TACTATTTTG ACGCGGTCGG TCCAAGCTCT CCCTTTATCC TGATGGGCAC CGGCAACCTG
CTCTTCACGC TTTATGCCGT CTGGCTGATA CTCAAGGGCT TTAACGAAAA TGCCCAGCAC
GAGATATTAG AGAAAAAACA TAAAACCAAA CTCAACTTAA AACCCATGAT TTTCATGGCC
TCCACCCTGC CCCTCATCTG GCTGGTCGGT CGGGTTCTCA TGAGCGGCTA CGTGCCGGGC
AATTCGGTAG GCCAAATGCC CGTGGGCTTC ATCAACCGCT ATCTGGGGGA TTGGGCATTT
AATTTTCTCT TATTTTCCCT CGCTCTGCGC CCTATCTATG AGATTACTGG CGTTAAAAAA
CTCGCCCAAT ACTCACGCAT GATCGGGCTT TATGCGTTTT TCTACGCACT GCTGCATGTA
TTAACCTACC TCTGGCTAGA GTGGATCTTT AACTGGCATG AGATTGTCGA TGACGTCACC
AAACGCTCCT TTATCCTGTT GGGGGTCATC GCCTTTTTAA TTATGATCGT GTTGGCTGCG
ACCTCACACA ATCAGATTAT CCGGCAAATG GGCGGCAAAC GATGGAAATT TTTGCATAAA
TTCACGTATA CTATGAATAT TCTGGTGGCG TTGCACTTTA TTTTCGCCGC CACCCATGAA
AATGGCGAAG CCTACGCTTA TGCCTCCTTA GTAGCGGTGT TGCTGGGGTA TCGTGCGCAC
CAAGCCTGGA AACGCCGCAA CGGCACAAGG GATCTGCAAC GAAAACGCCA CGCTATTCTG
CCCACGTAA
 
Protein sequence
MLALSRSFRT EHILYMLSVM STLAIALAVG VQPLFLDEVL KIPFEKAGTI NAHLTVVTEM 
ISLFVVGYTG FRYGRTFRAQ LIFYGFLCIL IGSLLAPWSG RLQIAIGVGG LAFYYLMRTL
ISIGTNTVQM ETTTWMGDVS VHDHKPKLML GVISMMVLGS TILYSIIIQI PHDTGTVNFV
LALPILVGLA GALLTRYNLH KTTRPGTELK ERPYDRIWSL VTGDARMQLC FAASFYTRAD
MIVVSLFLSL WLNSMADMVG ASRLYATAHA AGLMGVVGAS TLISIPVWIR FMEHHSRVAA
IGAALALSGL GFVMLAFVVN PFQWIVVLPL IVIGMGSGGA LIAPKVLAND LAPKDILGPL
QGLFFLTGGI GLVLMVQSGG YYFDAVGPSS PFILMGTGNL LFTLYAVWLI LKGFNENAQH
EILEKKHKTK LNLKPMIFMA STLPLIWLVG RVLMSGYVPG NSVGQMPVGF INRYLGDWAF
NFLLFSLALR PIYEITGVKK LAQYSRMIGL YAFFYALLHV LTYLWLEWIF NWHEIVDDVT
KRSFILLGVI AFLIMIVLAA TSHNQIIRQM GGKRWKFLHK FTYTMNILVA LHFIFAATHE
NGEAYAYASL VAVLLGYRAH QAWKRRNGTR DLQRKRHAIL PT