Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2239 |
Symbol | |
ID | 4480581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2855809 |
End bp | 2857737 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639722988 |
Product | ferric reductase domain-containing protein |
Protein accession | YP_866146 |
Protein GI | 117925529 |
COG category | [S] Function unknown |
COG ID | [COG2717] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0544393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCTC TATCCCGCAG CTTCCGTACG GAACACATCC TCTACATGCT CTCGGTCATG AGCACACTGG CGATTGCCTT GGCTGTGGGG GTGCAACCGC TGTTTCTGGA TGAGGTGCTC AAAATTCCTT TTGAAAAAGC CGGTACCATC AATGCCCACT TAACCGTTGT TACCGAGATG ATAAGCCTGT TTGTGGTCGG TTATACCGGC TTTCGCTATG GCCGGACATT CCGAGCACAG CTCATTTTTT ATGGATTTCT CTGTATCCTA ATCGGCTCGC TGTTGGCACC GTGGAGTGGC CGTTTACAGA TCGCCATAGG AGTCGGTGGA CTGGCTTTCT ACTACCTTAT GCGTACACTT ATCTCAATCG GCACCAACAC CGTGCAGATG GAAACCACCA CCTGGATGGG CGATGTTTCA GTTCACGATC ACAAACCTAA GCTAATGCTT GGGGTGATTT CCATGATGGT CTTGGGCTCA ACCATCCTCT ACAGCATCAT CATCCAGATC CCCCACGACA CCGGTACGGT CAACTTTGTG CTGGCCCTGC CAATTTTAGT CGGTTTAGCC GGAGCGCTCT TAACCCGCTA TAACCTACAC AAAACCACAC GCCCGGGCAC GGAGCTAAAA GAGCGCCCCT ATGATCGAAT CTGGTCCTTG GTCACTGGCG ATGCCCGGAT GCAGCTCTGT TTTGCCGCAT CGTTCTATAC CCGTGCCGAC ATGATCGTGG TAAGCCTATT TCTCTCTCTA TGGCTTAACT CCATGGCCGA TATGGTGGGG GCCTCGCGGC TTTATGCCAC CGCCCACGCG GCTGGCTTAA TGGGGGTAGT GGGGGCTTCT ACCCTGATCT CGATCCCGGT GTGGATCCGC TTTATGGAGC ACCATAGCCG GGTGGCGGCC ATTGGCGCGG CGCTGGCTCT CTCGGGCCTT GGTTTTGTTA TGCTGGCTTT TGTGGTCAAC CCCTTTCAAT GGATCGTGGT GCTCCCCTTA ATTGTCATCG GCATGGGCAG TGGTGGTGCT CTGATCGCGC CTAAAGTATT GGCCAACGAT CTTGCCCCAA AAGATATTCT TGGCCCACTC CAGGGGCTCT TTTTCCTGAC GGGCGGCATC GGCCTGGTGC TGATGGTGCA AAGTGGTGGT TACTATTTTG ACGCGGTCGG TCCAAGCTCT CCCTTTATCC TGATGGGCAC CGGCAACCTG CTCTTCACGC TTTATGCCGT CTGGCTGATA CTCAAGGGCT TTAACGAAAA TGCCCAGCAC GAGATATTAG AGAAAAAACA TAAAACCAAA CTCAACTTAA AACCCATGAT TTTCATGGCC TCCACCCTGC CCCTCATCTG GCTGGTCGGT CGGGTTCTCA TGAGCGGCTA CGTGCCGGGC AATTCGGTAG GCCAAATGCC CGTGGGCTTC ATCAACCGCT ATCTGGGGGA TTGGGCATTT AATTTTCTCT TATTTTCCCT CGCTCTGCGC CCTATCTATG AGATTACTGG CGTTAAAAAA CTCGCCCAAT ACTCACGCAT GATCGGGCTT TATGCGTTTT TCTACGCACT GCTGCATGTA TTAACCTACC TCTGGCTAGA GTGGATCTTT AACTGGCATG AGATTGTCGA TGACGTCACC AAACGCTCCT TTATCCTGTT GGGGGTCATC GCCTTTTTAA TTATGATCGT GTTGGCTGCG ACCTCACACA ATCAGATTAT CCGGCAAATG GGCGGCAAAC GATGGAAATT TTTGCATAAA TTCACGTATA CTATGAATAT TCTGGTGGCG TTGCACTTTA TTTTCGCCGC CACCCATGAA AATGGCGAAG CCTACGCTTA TGCCTCCTTA GTAGCGGTGT TGCTGGGGTA TCGTGCGCAC CAAGCCTGGA AACGCCGCAA CGGCACAAGG GATCTGCAAC GAAAACGCCA CGCTATTCTG CCCACGTAA
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Protein sequence | MLALSRSFRT EHILYMLSVM STLAIALAVG VQPLFLDEVL KIPFEKAGTI NAHLTVVTEM ISLFVVGYTG FRYGRTFRAQ LIFYGFLCIL IGSLLAPWSG RLQIAIGVGG LAFYYLMRTL ISIGTNTVQM ETTTWMGDVS VHDHKPKLML GVISMMVLGS TILYSIIIQI PHDTGTVNFV LALPILVGLA GALLTRYNLH KTTRPGTELK ERPYDRIWSL VTGDARMQLC FAASFYTRAD MIVVSLFLSL WLNSMADMVG ASRLYATAHA AGLMGVVGAS TLISIPVWIR FMEHHSRVAA IGAALALSGL GFVMLAFVVN PFQWIVVLPL IVIGMGSGGA LIAPKVLAND LAPKDILGPL QGLFFLTGGI GLVLMVQSGG YYFDAVGPSS PFILMGTGNL LFTLYAVWLI LKGFNENAQH EILEKKHKTK LNLKPMIFMA STLPLIWLVG RVLMSGYVPG NSVGQMPVGF INRYLGDWAF NFLLFSLALR PIYEITGVKK LAQYSRMIGL YAFFYALLHV LTYLWLEWIF NWHEIVDDVT KRSFILLGVI AFLIMIVLAA TSHNQIIRQM GGKRWKFLHK FTYTMNILVA LHFIFAATHE NGEAYAYASL VAVLLGYRAH QAWKRRNGTR DLQRKRHAIL PT
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