| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2156 |
|---|
| Symbol | |
|---|
| ID | 4483967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2649195 |
|---|
| End bp | 2650403 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639722900 |
|---|
| Product | sulfite reductase, dissimilatory-type alpha subunit |
|---|
| Protein accession | YP_866063 |
|---|
| Protein GI | 117925446 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits |
|---|
| TIGRFAM ID | [TIGR02064] sulfite reductase, dissimilatory-type alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.266529 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAA ACAAGCTGAA CCCCACCCCG AATCTGGACA CCCTCGAAGA GGGACCCTGG
CCCAGTTTCA TCTCCGGGTT CAAAGAACTC TATAACCGCA CTGGCAATAC CATGGTTCGT
GGTGTGCTCG ACCAGCTTAA CTACTCCTAT GAAACCCGCA TGGGTTACTG GAAAGGTGGC
GTGGTAGGTG TACACGGGTA CGGCGCTGGT ATCATCAGCC GCTACTCCAT GGTGCCTGAA
CTCTTCCCTG AAGCGAAAGA GTTCCACACC ATGCGCATCC AGCCTCCCCC AGGGCTTCAC
TACAGCACCA AAGCGCTGCG TGAAGTGTTG GATATCTGGG AGAAGCACGG TTCCGGCATC
ATCTCCATGC ACGGTCAAAC CGGCAACTTG CAGCTGCAAG GCGTTGTTCA AGCCAATGTG
CAAGAGCTGT TTGACGATCT CAACAAATTG GGTTGGGACT TGGGTGGCGC CGGCGCAACG
GTACGTACTG GTGCTTCCTG TGTCGGGCCC GCTCGTTGTG AGATGGCCTG CTATGACACC
CTGAAGATGC ACGAAAAAGT GCTTAAATAT TTTGCGGATC TAACCCACCG TCCCCAGTTG
CCTTACAAAG CCAAGTTTAA GTTTTCTGGC TGTGGTAACG ACTGCGCCAA CGCCATCCAG
CGTTCTGACT ATGCTGTGAT CGGTACTTGG AAAGACGAGA TCCAGGTTGA CGAAGCTGAA
GTAGCTAAGT TTATCGAGAC CCGTGGTGTA GCCTATTTGA CCAACAACGT CATCACCCGC
TGCCCCACCA ATGCCATCGT CATGAACGAA GATGGCAAGT CCATCACCAT CAACAACAGT
GACTGCGTAC GCTGCATGCA CTGCTTGAAC GTGATGACCA AGGCCCTTTC GCCGGGTAAA
GAGCGTGGTA TTGCCCTGCT GGTTGGCGGT AAAGGCCACC TGAAGGTTGG TAACATGCTG
GGTTCCGTGA TGGTGCCTTT CATGAAGATG GAAGACGAAG ACGATATCGA AGCCTTTATC
GACATGATCG ACTCCATGAT TGATTACTGG GCCGAGAACG CTCTGGACCA TGAGCGCGTT
GGTGAGACCA TCGAGCGCGT TGGCATGCAA CAATTCCTTG ATGCTGTCGG TTTGGAAGCC
AACCCCGACA TGGTGATTCA GCCCCGCGAC AACCCCTACT TCAAGGCTCC CTACGAAAAA
GTAGGTTGA
|
|---|
| Protein sequence | MAENKLNPTP NLDTLEEGPW PSFISGFKEL YNRTGNTMVR GVLDQLNYSY ETRMGYWKGG
VVGVHGYGAG IISRYSMVPE LFPEAKEFHT MRIQPPPGLH YSTKALREVL DIWEKHGSGI
ISMHGQTGNL QLQGVVQANV QELFDDLNKL GWDLGGAGAT VRTGASCVGP ARCEMACYDT
LKMHEKVLKY FADLTHRPQL PYKAKFKFSG CGNDCANAIQ RSDYAVIGTW KDEIQVDEAE
VAKFIETRGV AYLTNNVITR CPTNAIVMNE DGKSITINNS DCVRCMHCLN VMTKALSPGK
ERGIALLVGG KGHLKVGNML GSVMVPFMKM EDEDDIEAFI DMIDSMIDYW AENALDHERV
GETIERVGMQ QFLDAVGLEA NPDMVIQPRD NPYFKAPYEK VG
|
|---|
| |