Gene Mmc1_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2126 
Symbol 
ID4483948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2608332 
End bp2609030 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content52% 
IMG OID639722870 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_866033 
Protein GI117925416 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.116551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTT TGATTAAACC CTCTGCACTG GCCTTCTGTC TGGTGGTTGC TATGACGCCC 
GGATTTGGCA TGGCAGGCAA GCTGGAGAGC AGCAAGGATA GACTCTCCTA TGCTCTGGGG
GCCGATTTGG CCGATAGCAT GACCGAGAAC GGTTTTGATG TAGATCCAGA TATTTTAATC
ATGGGGCTGC GGGATAAATT GGCAGGTCAG GCGCTGCAAA TGAGCCCTGA GGAGATGCAA
AAGGCCATGA AAGAGGAAAT TTTGCGCCGC CGTGCCCTGG TGACGGAAAA AAAAGATAGC
CTCAAAAAAG ATAATCTAAA AGAGGCCGAA GCGTTTTTGA AAGAGAATGG CCGCAAGCCA
GGTGTGCGGA CCACCATGTC GGGGTTACAA TACAAAGAGC TCAAGGCAGG TACCGGTGCT
AAGCCGGCCA ATCGCACCGC TAAAGTTAAG GTGCACTACG AGGGCCGTTT GTTGGATGGT
ACCATTTTTG ACAGCTCTTA TAAGCGTAAC GAGCCTGTTG AGTTTACGCT GTCCCAAGTG
GTTATGGGCT GGACCGAGGG GCTGCAATTG ATGAAGACGG GCAGTATCTA TGAACTCTAT
CTACCTCCCC ACTTGGCCTA TGGCGAAGCA GGGCGTCCCC CTGTGATCGC CCCGAACAAG
CTGCTCATCT TCAAGGTGGA GCTGCTTGAG GTTAAATAA
 
Protein sequence
MMRLIKPSAL AFCLVVAMTP GFGMAGKLES SKDRLSYALG ADLADSMTEN GFDVDPDILI 
MGLRDKLAGQ ALQMSPEEMQ KAMKEEILRR RALVTEKKDS LKKDNLKEAE AFLKENGRKP
GVRTTMSGLQ YKELKAGTGA KPANRTAKVK VHYEGRLLDG TIFDSSYKRN EPVEFTLSQV
VMGWTEGLQL MKTGSIYELY LPPHLAYGEA GRPPVIAPNK LLIFKVELLE VK