| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2114 |
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| Symbol | |
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| ID | 4481343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2590637 |
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| End bp | 2592661 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639722858 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_866021 |
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| Protein GI | 117925404 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGCGT TTAACTTTCA TATTTTGGTT GTCGATGACA CCACCGCCAA TCGCTACACC
ATGAAAGCCA TCCTGGGTGG GTTAGAGCAC GTGGTCATAC TCGAAGCAAA CTCGGGCGAG
CAAGCTTTGG CACTGACCAT CGAACAACAG GTGGACCTCA TCCTGCTGGA TATTCAAATG
CCCGGCATGG ACGGCTTTGA AACCGCCCAC CTGCTCAAAA TGTCAGCCAG CACGCGCGAT
ATCCCCATTA TTTTTATTAC CGCCATTTAC CGTTCAGAGC ATTTTTATAA ACAAGGCTAC
CAAGTTGGGG CCGTGGATTA CCTGACCAAA CCGGTGGATG AAAATCTATT ACTCAACCGG
ATTTTGTCTT ATATGCGCCT GCTCCAGCGT GAAAAAAGCC TGCAACGCAC CATGGCAGAG
TTGCAGCGTA AGGAACATGC CCTGCAAACG GCCCATGATG AAATTGCCGA AACACTGCGT
GAACGCACCG TTGCGCTCGA CCGAGCCAGT GACGCGATCA TCTCCGCTGA CCAACAGGGC
CATGTGATTT TTTGGAACCA TGGTGCCGAA CGCATCTTTG GTTACCCCAA ACAGACCATT
TTACATACGC CCCTGCTACG TCTTATACCC GACCAACTAC ACGAGACATT CCTTTCCCAT
TTTTCAGAGG TCATCGCTTC TGGTGAAATT AAAAATTCCG ATAGTATTTA TGAGTTTAGC
GGCTTACGTG CCAATGGTGA AGTTTTCCCC ATTGAGGTCT CTGTCTCCTA TTGGCAAGGC
GCTGAGCGGC ATTTTTTCTC GGCTGTGGTA CGGGATATCA GTCAGCGTAA ACAATTGGAA
ACACAACTGC GTCACGCACA GCAAATTTCT GAATCGGCCA ACCGTGCCAA GAGCACCTTT
TTGGCCACCA TGTCACACGA AATTCGCACC CCTTTGAATA CCATTTTGGG CATGGGTCAA
CTGCTCGAAG AGACCGACCT AACTGAAATG CAACACTGGT GCGTTAATAT TCTTGGCAAT
TCGGGTCGGG CCTTGCTCAC CCTGATCAAT GATATTCTTG ATCTTTCTAA AATTGAAGAG
GGGCATCTTT CACTGGAACA CACCCCTTTT GACCTTCATC AACTTTTACA GGAAGTCGAG
GAGCTGTTTA CCTTCTCGGC CTTAGCTAAG GGCATTACAC TGCGCGGCCA TTTTTCAGAA
AGCCTGCCCC AGTGGGTTAT GGGAGACCCT ACCCGCCTAC GCCAAGTGCT GCTCAATCTG
CTGGGCAATG CCATTAAGTT CACCAAACAG GGCTTTGTTG AACTCTCCGC ACAAACCATG
GCAGAGGATG AAATCTGTTT TTCTGTTTTT GACAGCGGCC CTGGTATTGC CAAGGAACGC
CAGCAAGAGA TTTTTTTACC CTTTACCCAA GCGGACTCCA GCACCACCCG CAAATATGGC
GGCAGTGGCC TCGGTTTAAC CATCTCTCGG CGGCTGGTTA AGTTGATGCA TGGACAGATC
CAATTGGAAA GCAGGTTGGG GAAAGGGTCT CGTTTCTATT TTTCTTTAAA TTTACCCCAA
GCGCCCACAG AACGGATCCC GCCACCCTCA CTCCCCGCCA CAACCGTTGT GCACAGTTCC
CCGCAACGGG CTTTAACCAT TTTGGTGGCC GATGATTCCG ACGATAACCG TATTCTCATT
GAAGCCTTTT TAAAAAAATC CCCCTACAAA TTGGTCATGG CCAGCAACGG ATTGGAAGCA
CTGGAAGAAT TTAAAAAACA ACCCTTTGAT CTGGTCTTGA CAGACATTCA AATGCCCATT
ATGGATGGGT ATGAAGCGAT CCGTCAGATC CGGCAATGGG AAAGCAGCCA AAAGATGACC
ACCCGCACAC CCATTATCGC CTTAACCGCC CATGTGATGA AGGAAGAAGC CGAACAGATC
GAACAGGCGG GGGGAGATCT CCACCTGAGC AAACCCATTC AGAAAAAACG CTTGTTGGAA
GTCATTCAAA CCCTTACCCA TGACAACCGA CTTAGCGTAC GCTAA
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| Protein sequence | MSAFNFHILV VDDTTANRYT MKAILGGLEH VVILEANSGE QALALTIEQQ VDLILLDIQM
PGMDGFETAH LLKMSASTRD IPIIFITAIY RSEHFYKQGY QVGAVDYLTK PVDENLLLNR
ILSYMRLLQR EKSLQRTMAE LQRKEHALQT AHDEIAETLR ERTVALDRAS DAIISADQQG
HVIFWNHGAE RIFGYPKQTI LHTPLLRLIP DQLHETFLSH FSEVIASGEI KNSDSIYEFS
GLRANGEVFP IEVSVSYWQG AERHFFSAVV RDISQRKQLE TQLRHAQQIS ESANRAKSTF
LATMSHEIRT PLNTILGMGQ LLEETDLTEM QHWCVNILGN SGRALLTLIN DILDLSKIEE
GHLSLEHTPF DLHQLLQEVE ELFTFSALAK GITLRGHFSE SLPQWVMGDP TRLRQVLLNL
LGNAIKFTKQ GFVELSAQTM AEDEICFSVF DSGPGIAKER QQEIFLPFTQ ADSSTTRKYG
GSGLGLTISR RLVKLMHGQI QLESRLGKGS RFYFSLNLPQ APTERIPPPS LPATTVVHSS
PQRALTILVA DDSDDNRILI EAFLKKSPYK LVMASNGLEA LEEFKKQPFD LVLTDIQMPI
MDGYEAIRQI RQWESSQKMT TRTPIIALTA HVMKEEAEQI EQAGGDLHLS KPIQKKRLLE
VIQTLTHDNR LSVR
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