Gene Mmc1_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2103 
Symbol 
ID4481332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2574955 
End bp2575596 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content60% 
IMG OID639722847 
ProductABC transporter related 
Protein accessionYP_866010 
Protein GI117925393 
COG category[R] General function prediction only 
COG ID[COG4619] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.71434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACA CACAAACATT GGAGATAGAT CCCCAAGCGG GACTCTCCCT GAGCGGCTTT 
ATCCTGCCTG ACGGGCACGC CTTGGCGCTG CGTCTTGCGC CGGGCACATG CTGTGCCATT
ATGGGTCCTT CGGGCAGTGG CAAATCCTTG TTGCTCCGCG CCATTTGTGA TCTGGACCCT
CACACGGCCC AGGTGCAGTG GCAAGGAGCA TGGCAGCAGC AGACCCCTGC CCCCCAATGG
CGTAGCCGCG TGGCCTACCT ACCCGCTGAG AGCGCTTGGT GGCATGATCG CGTGGGTGAG
CACTTTACCG ATTCTGACGC AGCCATCCCC CTGCTTCAGG CGCTGCACTT GGAACCGGCC
TGTTTATCCT GGTCCATGCA CCGTACCTCC AGCGGCGAAC GGCAACGCAT GGCCATTGCT
CGTCTGCTGG CCCGCCAACC TCAACTGTTG CTGTTGGACG AACCCACCGC CAATCTGGAT
GCCACCCGTA CCCAGTTGGT TGAGCAGCTA TTCAACCGCT ATCGAACCCA CCACCAGACC
ACGCTGTTAT GGATCACCCA TGATCTGGCT CAGGCCAAAC GGGTTGCCAC CCAGATCATT
GAACTGACCC CTGGCCACGG TTTTCGTGAG GTGCAACCAT GA
 
Protein sequence
MNHTQTLEID PQAGLSLSGF ILPDGHALAL RLAPGTCCAI MGPSGSGKSL LLRAICDLDP 
HTAQVQWQGA WQQQTPAPQW RSRVAYLPAE SAWWHDRVGE HFTDSDAAIP LLQALHLEPA
CLSWSMHRTS SGERQRMAIA RLLARQPQLL LLDEPTANLD ATRTQLVEQL FNRYRTHHQT
TLLWITHDLA QAKRVATQII ELTPGHGFRE VQP