| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1996 |
|---|
| Symbol | |
|---|
| ID | 4483216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2472814 |
|---|
| End bp | 2473392 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639722739 |
|---|
| Product | appr-1-p processing domain-containing protein |
|---|
| Protein accession | YP_865903 |
|---|
| Protein GI | 117925286 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAC TACCTTTTGA AATAATATTT GTTGACCAAA ATGATGATGT TATCAGATCT
CTTTGGCATG TTTTTGGAGG CTGGTCTGGA ATTTCTTTTT TTAGTGGTGA TCTGCTTTCA
GTTGCAAGTA ATACGGTAGT TTCTCCAGCG AATAGTTATG GGTATATGGA TGGCGGTATT
GATGCAGAGT ATGTGAATTT TTTTGGTCAG GGGTTGCAGA CCAAGGTTCA GGAAGGAATA
AGTAGACGAG AAGAAGGTTT TTTGCCTGTT GGAGCCGCTA TGTTTGTGAA AACTGGGAAT
GCATTGATTC CCAATATGAT TGTTGCTCCA ACCATGATGC AGCCAGGTGG CGTTCCGCCG
AGTAATGTGT TTTATGCGAT GTCTGCTATT TTGAATATGG CGATGAAAAA ACAAAAGGAG
ATCACGCATC TGTATGTACC TGGTTTAGGA ACCGGTGTTG GCCTTGTTCA GCCAGAAATT
GCAGCGCAAG AAATGTTCAT GGCTTATGAA AAATTTGTGG GTAGAGTCTT CTCAGAAAAT
TATCATATAC CGAAGAGCCT GCCGCAGAAT GGGGCGTGA
|
|---|
| Protein sequence | MQKLPFEIIF VDQNDDVIRS LWHVFGGWSG ISFFSGDLLS VASNTVVSPA NSYGYMDGGI
DAEYVNFFGQ GLQTKVQEGI SRREEGFLPV GAAMFVKTGN ALIPNMIVAP TMMQPGGVPP
SNVFYAMSAI LNMAMKKQKE ITHLYVPGLG TGVGLVQPEI AAQEMFMAYE KFVGRVFSEN
YHIPKSLPQN GA
|
|---|
| |