| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1917 |
|---|
| Symbol | |
|---|
| ID | 4483243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2384943 |
|---|
| End bp | 2386160 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639722664 |
|---|
| Product | 6-phosphofructokinase |
|---|
| Protein accession | YP_865831 |
|---|
| Protein GI | 117925214 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.010308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.94852 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCG GTAAAGTTCT CATCGCACAA GGTGGCGGTC CCACGGCGGT CATCAACCAG
TCCCTGGTCG GGGCGGTGTT GGAGGCCCAA CGCTATGCCC AGGTTGATCG CATCTATGGT
GCGGTACACG GGGTACGGGG CATTGTTGAC GAAAATTTTA TGGATCTCTC CATGGAGACC
GCCGGTAATT TGGAGCGGGT CGCGGCGATG CCCAGCTCTG CCCTAGGCTC CACCCGCGAC
AAGCCCGACC GCGCCTACTG CGCTGAGATG TTCAAAGTGC TCAAGGCCCA TGACATCCGC
AGCTTTTTTT ATTGCGGCGG CAACGACTCT TCTGACACCG TGCGCATCGT TAAAGAGTTT
GCCGATGAGG CCAACTATGA ATTTACCGCC ATGCACATCC CCAAAACCAT TGATAATGAC
CTCATGGCCA ATGACCACAC ACCGGGCTTT CCATCGGCGG CCAAATTTGT CGCCTGCGCC
TTTGCCGGGG TCAACATGGA TAACCGGGCC CTGCCCGGCG TCTATGTAGG GGTGGTTATG
GGGCGCCATG CCGGTTTTTT AACCGGGGCT GCTGCCATGG CGCGGGTATT TGCCGATGAT
GGCCCTCACC TGATCTATGT CCCCGAACGC ACCTTTGATA TGAATACCTT CTTGGCCGAC
GTCAAAAGCA CCTACGACAA ATATGGGCGC TGTATCGTCG CGGTTTCTGA GGGTGTGCAT
GATGCCGAAG GCACCCCCAT TGTGACCAAA TTGCAAGAAA ATGTGGAGCG GGATGCCCAC
GGCAACGTGC AGCTTTCGGG CACCGGTGCT TTGGCTGACC TGCTGTGTGA CGAAATCAAG
GCCAAATTGG GCATTAAGCG GGTACGCGGC GACACCTTTG GCTATCTACA GCGCAGCTTT
CTGGGCATTG TTTCTGAGGT AGATGCCCGC GAAGCCCGCG AAGTGGGCCA AAAAGCGGTG
CAAGAGGCTC TCCGCCACAA CGCCAGCGGC ACCATCACTA TCAAACGGGT TGGCAACTAT
GCTTCGGCCT ATGAGTTGGC CAATGTTAAA GAGGTCGCCG CACTCACCAA AGTGATGGCC
GATAACTTTA TCACCACCGC CAGCAATGAC GTGACCGCCG ACTTTATCCA CTATCTGCGC
CCGCTGCTGG GCAGCAACCC CCTGGAGCAT GCCGCCCGCT TGATGGCACC CATGGTAGAA
AAAATTCTGC ATAAATAA
|
|---|
| Protein sequence | MKSGKVLIAQ GGGPTAVINQ SLVGAVLEAQ RYAQVDRIYG AVHGVRGIVD ENFMDLSMET
AGNLERVAAM PSSALGSTRD KPDRAYCAEM FKVLKAHDIR SFFYCGGNDS SDTVRIVKEF
ADEANYEFTA MHIPKTIDND LMANDHTPGF PSAAKFVACA FAGVNMDNRA LPGVYVGVVM
GRHAGFLTGA AAMARVFADD GPHLIYVPER TFDMNTFLAD VKSTYDKYGR CIVAVSEGVH
DAEGTPIVTK LQENVERDAH GNVQLSGTGA LADLLCDEIK AKLGIKRVRG DTFGYLQRSF
LGIVSEVDAR EAREVGQKAV QEALRHNASG TITIKRVGNY ASAYELANVK EVAALTKVMA
DNFITTASND VTADFIHYLR PLLGSNPLEH AARLMAPMVE KILHK
|
|---|
| |