| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1879 |
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| Symbol | |
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| ID | 4481154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2334750 |
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| End bp | 2336603 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639722624 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_865793 |
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| Protein GI | 117925176 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000011349 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGATC CTTGTGAGTC CCACGAAGCC CGGTTGCAGC GGTTAAAGCG CGACGTTAAA
CAGCTACCGT TAAAGCCCGG TGTTTACCGT TTTTATGACG ACGCTGGCCA ATTGCTCTAT
GTGGGTAAGG CCAAGGCGCT GCGTAAGCGG GTAAGCAGCT ATTTTAACCA TCTGGCGGGC
CACTCTCCCA AAACGGTGGT GATGGTCAAA CAGATTATGC GGCTGGAGTT CACCACCACC
GCCAATGAAA ATGACGCCTT GGTGTTGGAA GCCAACCTGA TTAAGGCCCA CCAACCTCGC
TACAATGTGC TACTCAAGGA TAATAAATCC TATCCCTATC TGCATTTAAC CACCGATCAT
GCCTATCCAA GACTGGCGCT GTATCGGGGT GACCGCAAGG CGAGGGGCCG TTTTTTTGGC
CCCTATCCCT CGGCCCATGC GGTGCGGGAA ACCCTGAATT GGCTGCAAAA GATCTTTCCG
GTGCGCCAGT GTGAGGATAG CCAATTTAAC CACCGTAGTC GTCCTTGCCT GCAATATCAA
ATCCATCGCT GTGGTGGTCC CTGTTGTGAC CGTATCGATG TCACAAGTTA TGGTGCCATG
GTCTCCCAGG TTACGCTGTT TTTAGAGGGC AAAGATAAAC AGTTGGTGAA TACCCTCAAA
GAGGCGATGT GGCAAGCGGC ACAGGCGCGG GATTTTGAGG GTGCGGCACG GCTGCGGGAT
CGTATTGCTG GTATTGAGCA TGTGCAGGAG CGGCGGCGGC TTAATCTTTC CGGTGAGATT
GATCTGGATG TGATGAGTGT GGCGGTGGGC TTAAAAAAGG CGGTGGTGCA GGTCTTTTTT
ATTCGTGCGG GGATTAATTT GGGCAACCGG GCCTTTTTTC TGGAGCGGGG GGAGGAGGAT
GACCCCAGCG AGATTTTACA GGCTTTTGTC AGCCAATTTT ATCTGGATAA ACCGCCGCCA
CCGGAGATTT TACTGGAGCA TCTGCCCCAG CAGCAGGAGA TGCTAGAAGA GGCGCTTAGC
GCACGCTTGG GTAAGGCGGT CAAGTTGCGC CAGCCGCAAC GGGGGGAGCG GCGTCGCCTG
TTGGAGATGG CGGTGGAGAA TGCCCAACAA GCGCTTAAAC AGTATCAATC CAGCCGTGAC
CATGTGCGGA CCCAGTTAGA GGCACTGCAA GAGCTGTTTA ATCTGGCCGA GCCACCACAA
CGCATTGAGA TCTACGATAA CTCCCACATA CAAGATCAGC ATGCGGTGGG GGCTATGGTG
GTGTTTGGGG CCGATGGGTT TGAAAAAAAT CAATATCGAA AATTTAATCT AGAAGCCTCA
TCAGCCCCCG ATGATACCGC CCGCATGATT GAGGTGTTAA CACGCCGCTT TAAACGGTTG
AAGGAGGGGG AGGGGCGTTG GCCTGATCTG GTGCTGTTGG ATGGCGGTAT TGCCCAGCTT
AACGCGGCGA TGAAGGTGGT TGAGGAGCTG CAAATTGATG GGGTGGCTTT TAGCGCCATT
GCCAAGGGTC CGCAGCGCCA TGCGGGACGG GAGCAGCTTT TCTTGCCCGA TCGGCCAAAT
CCGCTTATAC TGCCGCACGA TGCACCCTTG TTGCACTTTT TACAGGTGGT GCGGGATGAG
TCTCACCGCT TTGTTATTGG TTATCACCGC ACGCGTCGGG CTAAAGGTCA AACCAGCTCT
CGGCTAGATG GTATAGCAGG GGTTGGTGCC CAGCGCAAAA AGGCGTTAAT TAAGCAGTTT
GGTTCGGTCA AAGGGGTGCG CCAGGCCACA CTGGCGGAGA TTGCGGCCTT ACCAGGTTTT
TCTACGGAGC TGGCCGCGAC GATCTTGGCG ACCCTGGATG AGCATCATGC TTGA
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| Protein sequence | MNDPCESHEA RLQRLKRDVK QLPLKPGVYR FYDDAGQLLY VGKAKALRKR VSSYFNHLAG
HSPKTVVMVK QIMRLEFTTT ANENDALVLE ANLIKAHQPR YNVLLKDNKS YPYLHLTTDH
AYPRLALYRG DRKARGRFFG PYPSAHAVRE TLNWLQKIFP VRQCEDSQFN HRSRPCLQYQ
IHRCGGPCCD RIDVTSYGAM VSQVTLFLEG KDKQLVNTLK EAMWQAAQAR DFEGAARLRD
RIAGIEHVQE RRRLNLSGEI DLDVMSVAVG LKKAVVQVFF IRAGINLGNR AFFLERGEED
DPSEILQAFV SQFYLDKPPP PEILLEHLPQ QQEMLEEALS ARLGKAVKLR QPQRGERRRL
LEMAVENAQQ ALKQYQSSRD HVRTQLEALQ ELFNLAEPPQ RIEIYDNSHI QDQHAVGAMV
VFGADGFEKN QYRKFNLEAS SAPDDTARMI EVLTRRFKRL KEGEGRWPDL VLLDGGIAQL
NAAMKVVEEL QIDGVAFSAI AKGPQRHAGR EQLFLPDRPN PLILPHDAPL LHFLQVVRDE
SHRFVIGYHR TRRAKGQTSS RLDGIAGVGA QRKKALIKQF GSVKGVRQAT LAEIAALPGF
STELAATILA TLDEHHA
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