Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1847 |
Symbol | |
ID | 4484000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2291972 |
End bp | 2293081 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639722589 |
Product | peptidase RseP |
Protein accession | YP_865761 |
Protein GI | 117925144 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000683327 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATGAGG CCTTTTGGGC GGTTGTCGTC CTGGGAATAT TGATCTTTGT CCATGAGATG GGCCATTTTT TGGTGGCGCG TTGGATGAAG GTACGGGTGC TGGTCTTTTC CCTGGGCTTT GGCCCTAAGC TCTTGAGCTG GCGTGGCCGG GGCGGGGCGG AAGGGACCGA ATATTGTTTG AGCCTCATTC CACTGGGTGG CTATGTCAAA ATGTTTGGCG AAGCCGGTGT GGTCGAGGAT GAACAAAACG GTGAACGTGC CTTAACGGAA GAGGAAAAGC AGGGCTCTTT CGCCCATAAA TCCTTGCAAG CGCGTTTTGC GGTGGTGTTG GCCGGCCCCT TGTTTAACTT TATCTTTGCG ATTTTTGCCC TGTGGGCGGT CTATGCCATG GGGGTTGAGA AGATGTACGC CGATGTTGGC AAAGTGATTG AGCAAGGCCC AGCGGCGATG GCGGGCGTAC AGGTTGGCGA CCGCATCATC AAGGTGGATG GTGAAGCGGT TGAGGATTGG ATGGCGATGC GAGAGCGCAT TCGTGCGTCA AGCCATGGTG TGATTAAGCT TGAGGTGCTG CGTGGGGATA AACAGCTCAC CTTGACCTTA AACCCAGAGA TGGGGGATAC GGTCACTAAG TTTGGCGAAC CCACTAAAAA GGCACGCATC GGTATTGCAC CAAGTGGTGA GACTTTTGCG GTAGAGTATG GGGTAGGCGA AGCCTTTTGG TTGGGGATAG ATAAAACCTG GGAGTTCTCA ACGCTCATTT TTACCTCGAT AAAAAAAATG ATCACGCAAG AGATTCCCGC CGATCAAATC GGTGGCCCCA TTGCCATCGC CAAGATGGCT GGCAGTACAG CCGAGATGGG TTTTGCCAGC ATGTTGATGT TTATGTCCCT CATCTCGGTT AACCTGGGGG TATTAAATCT TTTGCCGATT CCGGTGCTGG ATGGTGGGCA CCTGCTGTTT TACGTGATGG AGGCGATTAA AGGCGGCCCC ATTAGTGAAA AAGCCCAGAT GATTGCCATG CGCATAGGAC TTTCTTTACT GTTAGCACTA ATGGTGCTTG CATTTTACAA CGATTTGGTC AGACTGTTCG GATCGTCCGC TTCCAATTAG
|
Protein sequence | MNEAFWAVVV LGILIFVHEM GHFLVARWMK VRVLVFSLGF GPKLLSWRGR GGAEGTEYCL SLIPLGGYVK MFGEAGVVED EQNGERALTE EEKQGSFAHK SLQARFAVVL AGPLFNFIFA IFALWAVYAM GVEKMYADVG KVIEQGPAAM AGVQVGDRII KVDGEAVEDW MAMRERIRAS SHGVIKLEVL RGDKQLTLTL NPEMGDTVTK FGEPTKKARI GIAPSGETFA VEYGVGEAFW LGIDKTWEFS TLIFTSIKKM ITQEIPADQI GGPIAIAKMA GSTAEMGFAS MLMFMSLISV NLGVLNLLPI PVLDGGHLLF YVMEAIKGGP ISEKAQMIAM RIGLSLLLAL MVLAFYNDLV RLFGSSASN
|
| |