Gene Mmc1_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1836 
Symbol 
ID4483989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2279491 
End bp2279904 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content51% 
IMG OID639722578 
Producthypothetical protein 
Protein accessionYP_865750 
Protein GI117925133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00093495 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA AGGAACTCGT CGACCCCCAA GCCTTAGAAA AAATGTTCCA AAAGGAGTGT 
AAAACCCGGC TAAACCGGTT TACCACCACG CTCTCTCACA CCGCTCAAGA CCCGGATGAT
GAAAGCCATT GGAACGCGCT ACACCAAGAA TTGGATAGTA TTGCCAACGC GGCACGCAGT
GTGAATGATC AGGAGACCGA ACGGGTATCC CGTAAATTGG CGACACTCGC GCGACAGGCG
CGGCAGCGTC AACCGTTGCG TATGAAAGTA CTAGAAATCT TATTACGGGG GGTAACCGCC
ATCCATTGCC ACTGCCTGGA ACCTCAGCGT TCCGCAACCG GCGAGGTGCT GGATTATGTT
CGTTTGGAGA AGCGTCTCAT TGAGTTTACT TATGATACTC AAGACGAACA GTAA
 
Protein sequence
MSMKELVDPQ ALEKMFQKEC KTRLNRFTTT LSHTAQDPDD ESHWNALHQE LDSIANAARS 
VNDQETERVS RKLATLARQA RQRQPLRMKV LEILLRGVTA IHCHCLEPQR SATGEVLDYV
RLEKRLIEFT YDTQDEQ