Gene Mmc1_1826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1826 
Symbol 
ID4480442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2264131 
End bp2264892 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content52% 
IMG OID639722568 
Producthypothetical protein 
Protein accessionYP_865740 
Protein GI117925123 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.768491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAT GGGGTAATAA AATTGAGGGC AAGCGCTGCC ATGAAGTGGA CTTTGAGATC 
CATGGTAGTG ACCTTCAGTT GGTGGAAGTA GAGTTGGACC CCGGCGAAAC GGTCATCGCC
GAAGCCGGGA CCATGTGTTA TATGGAGGAA AATATCAGCT TTGAAACCAA GATGGGGGAC
GGTTCACAAG CCGATGAGGG TTTTCTGGGG GGGCTGCTGA GCATCGGCAA GCGGGCTTTG
ACGGGAGAGT CCATCTTTAT GACCCACTTT TCCAACCGGG GCTCGGTCAA ACGTAGGGTG
GCTTTTGCGG CCCCCTTTCC GGGCAAGATT ATTCCCCTGG ATATGCGTCA ACTTCCTGAA
CAGACGCTTT ATTGTCAACG AGACGCCTTT CTCTGTGCGG CTTTGGGTAC GCAGGTCTCC
ATCGCTTTTA GCCGCAGGTT GGGCGCTGGA TTTTTTGGGG GAGAGGGCTT TATTCTACAA
AAGCTTGTGG GGGATGGCAT GGCTTTTATT CATGCCGGAG GGGTCATTGT CGAAAAAAAG
CTCGAAAATC AGCGTCTGCG GGTGGATACC GGCTGTTTGG TTGGTTTTAC CCCAGGTATT
GATTACAATA TTGAGGCCGC TGGGGGCATG AAATCCATGA TTTTTGGGGG GGAAGGCATC
TTTTTAACCA CCCTTGCAGG AACGGGCACC GTCTGGTTGC AAAGCCTGCC TTTTGCCAAT
CTGGCCGACC GCGTATTAGA ACGTTTACCG GCCCGCGAAT AG
 
Protein sequence
MALWGNKIEG KRCHEVDFEI HGSDLQLVEV ELDPGETVIA EAGTMCYMEE NISFETKMGD 
GSQADEGFLG GLLSIGKRAL TGESIFMTHF SNRGSVKRRV AFAAPFPGKI IPLDMRQLPE
QTLYCQRDAF LCAALGTQVS IAFSRRLGAG FFGGEGFILQ KLVGDGMAFI HAGGVIVEKK
LENQRLRVDT GCLVGFTPGI DYNIEAAGGM KSMIFGGEGI FLTTLAGTGT VWLQSLPFAN
LADRVLERLP ARE