Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1818 |
Symbol | |
ID | 4480434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2252730 |
End bp | 2253788 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639722560 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_865732 |
Protein GI | 117925115 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000224471 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.900766 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGAT TCTATAAGCC ATCATTACCG CTGTTTTATC TGTTACTCAT GCTGCCCGTT TGCTCACTAC AGGCCGCCAG CTTAGTCACA ACCCCGGCCA TAAACCGAGA ACTCCCCGTA TGGTTGACAC TCGATGGTGT GGTAGAGGCC GAAAACCAAG CCACCATAAC GGCGAAAACA TCCGGTGAAA TCATAGAATT AAACTTTGAC GTTAACGATT ATGTACATAA AGGGGATGTG CTACTACGCT TTAAAAATCA GCGTAATCAG GCCGAAATCG CCCAAGCCCG TGCCTCCGTC GCCCAAGCCA AAGCGCAACT GACGGAAGCA CAAAACAGTT ATGACCGTTC CGTGCAATTG TTGGAAAAAA AGGTGGTCAG CAGTGCCAAA ATGGACCAAA CAGAGTCCGC CCTAAAAGCG GCCAAGGCTC AATTAGAGTT GGCTAACGCT GGACTAACCA TCGCCCTGGA TAAACAAGAG GATCATGTCG TGCGCTCCCC TTATTCAGGA TACATGCTTA AACGGCATGT GGATCCTGGT GAAAATGCCC AAGCTGGCCA AGCGCTTTTT ACAGGCATTT CACTGGATGC CTTGCGGGTC CATGTTATGG TGCCACAAAG TCGCATTGCT GCCGTGCGCC GCTTTAATGA AATGGCCATT AAACTGGCCG ATGGTCGTCA AGTCACCCCC AAGGATATCA CCTTTTTCCC CTATGCCCAC GCAGCCAGTC ATGCCTATGG GGTACGGTTA CACCTGCCCG AGGGACTCGA CAACCTTTAC CCCGGTGCCC TGGTGCGGGT GCAGTTTGTC ACCGGGAGCA AACAGCGGGT ATTAATTCCC GTGCCGAGCG TTGTCACACG TAGCGAAGTA ACGGCAGCCT ATGTGGTGGA CGGTGGCGGC CATGTCTCGT TGCGGCATCT ACGCACCGGG CGAACCTATG CAGATTTGAT CGAGGTGCTG GCCGGACTTG AGAGCGGTGA GCAGGTCGCC GTGGATCCCG TGTTGGCGGG GCAACAAGCG CGTGCCCAGC TGCCCAGTAT GGAGGCTTAT CATGAGTGA
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Protein sequence | MRRFYKPSLP LFYLLLMLPV CSLQAASLVT TPAINRELPV WLTLDGVVEA ENQATITAKT SGEIIELNFD VNDYVHKGDV LLRFKNQRNQ AEIAQARASV AQAKAQLTEA QNSYDRSVQL LEKKVVSSAK MDQTESALKA AKAQLELANA GLTIALDKQE DHVVRSPYSG YMLKRHVDPG ENAQAGQALF TGISLDALRV HVMVPQSRIA AVRRFNEMAI KLADGRQVTP KDITFFPYAH AASHAYGVRL HLPEGLDNLY PGALVRVQFV TGSKQRVLIP VPSVVTRSEV TAAYVVDGGG HVSLRHLRTG RTYADLIEVL AGLESGEQVA VDPVLAGQQA RAQLPSMEAY HE
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