Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1805 |
Symbol | |
ID | 4483685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2235285 |
End bp | 2236223 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639722547 |
Product | response regulator receiver modulated CheW protein |
Protein accession | YP_865719 |
Protein GI | 117925102 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.123386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATTA ACCTTATGGA TGAAGTGGAT CAACGCACCA ATCTGGCCTT TACCAACCAG ATGGAGATGC TTACCTTCTA TCTAAGCGAT CATCAGCAAT ATGGAATTAA TGTATTTAAA ATCATTGAGG TTATTGAGAC CCCTAAACAG GTTACACAGG TCGCTAAGCT CCACCCAGCC ATTGTGGGTA GCATCAATTT TCGCGATACC ATGGTAACAG TGCTCGACCT TAGCGCGGCG ATGGGCCTGG ATGCGGTAGC GTTTCGACAA GAGGTTAGTT ACATCATTAT TTGTGAATAC AGCAACACCG TGCAGGGGTT TTTAATCAGT CAACCCAACC GATTGCTGCA AAAAAGTTGG AAAGAGATTA AACGTCCTGG TTATGGTGTG TTGGATCAAG GCTTTCTCAC CGCCATTACC TATGACGAAG AAGAACATGC CATTCAAATT TTGGATATTG AGCGCATTCT AGGCGAAGTG TTGGGGATCT CCCTTGAGGT TTCTCAGGAG ATCGTTAAGC AAGGTACAGG AATTGATTTT TCCCAGGCTT TGGTGTTGAT CGTGGATGAC TCGCGGGCGG CACTCAAAAT GCTGGGGAAC ACCTTGGACA AGCTAAAAAT ACCTTTTGTG GAACAGAGCT GTGCAGAAGA TGCCTTGAAC TACCTGCATA AAAATTTGGA CGCTGAAGGG CGTACTCCGG TCAACATGAT TATCTCGGAC ATTGAAATGC CCGGCATGGA TGGCTTTACG CTGACCCGTA CCGTAAAAGC CCACCCGGAA CTACAGAGCA TTCCGCTTAT CCTACACAGT TCTATGAGCA ACAAGGCCAA CCGGGATAAG GCGATTAAGG TTGGTGCGGA TGATTTTGTG GCCAAATTCA AGCCCGATGA GATCGCCCGT GCCATTATGG AACATCTCGG GGTTATGTTG CCGGGATAG
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Protein sequence | MSINLMDEVD QRTNLAFTNQ MEMLTFYLSD HQQYGINVFK IIEVIETPKQ VTQVAKLHPA IVGSINFRDT MVTVLDLSAA MGLDAVAFRQ EVSYIIICEY SNTVQGFLIS QPNRLLQKSW KEIKRPGYGV LDQGFLTAIT YDEEEHAIQI LDIERILGEV LGISLEVSQE IVKQGTGIDF SQALVLIVDD SRAALKMLGN TLDKLKIPFV EQSCAEDALN YLHKNLDAEG RTPVNMIISD IEMPGMDGFT LTRTVKAHPE LQSIPLILHS SMSNKANRDK AIKVGADDFV AKFKPDEIAR AIMEHLGVML PG
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