| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1779 |
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| Symbol | |
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| ID | 4483659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2199436 |
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| End bp | 2200839 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639722521 |
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| Product | 3-isopropylmalate dehydratase, large subunit |
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| Protein accession | YP_865693 |
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| Protein GI | 117925076 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00189563 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCCC AAACTCTGTT TGAAAAAATC TGGAATGCCC ATCTTATTCG TACCGATGAG
GATGGAACCA GTCTCATCTA TATTGATCGC CATTTGGTGC ACGAAGTGAC CAGCCCCCAG
GCTTTTGAAG GGCTACGCCT AGCTGGTCGC AAGGTGCGGC ATCCTGAGGC CACCTTTGCG
GTACCCGATC ATAATGTGCC CACCAAGGAT CTGGCGGGGG GGATTAAAGA TCCCGTCTCC
AAGTTGCAGG TGGATACTTT GGCAAGCAAT TGTCAGGCGT TTGGCATTAC CGAGTTTGGG
GTGGGGGATC TGCGCCAAGG GGTGGTCCAT GTGATGGCAC CTGAACAGGG TATCTCACTA
CCGGGCTTTA CCATGGTGTG CGGGGATTCC CACACCGCCA CTCACGGCGC TTTTGGTGCT
TTGGCGTTCG GCATTGGTAC CTCTGAGGTT GAGCATGTGT TGGCAACCCA AACCCTGATG
CAAAAAAAGC CCAAAACCAT GTTGATCCAG GTAGAGGGTG AACTGCCTGC GGGCAGTACC
GCCAAGGATA TTATCCTTTA CATTATCGGT AACATTGGTA CCGCAGGCGG TACCGGTTAC
GTGCTGGAGT TTGGCGGTAG CGCCATTCAA GCGCTCTCCA TGGAGGGGCG CATGACGGTC
TGTAATATGG CCATTGAGGC AGGGGCCCGG GCGGGCATGG TAGCGGTTGA CGAAAAAACC
ATCGCTTATG TGCAGGGTCG CCCCTACGCC CCCAAGGGGG AAGCCTGGGA GAAGGCGGTC
GCCCAGTGGC AAACGCTGAA ATCCGATGAG GGTGCGCCGT TTGATGCGGT GGTCACGCTG
GATGCCCGTA ACATCGCCCC CCAGGTCACT TGGGGCACTT CGCCCGAGTT GGTAGCCCCT
GTGGATGGTT GTGTGCCCAA TCCGACTGAT GAACCCAATG GGGTCAAACG CGGGGCGATG
GAAAAGGCAT TGGCCTATAT GGGGCTGCAA GCGGGCACCC CCATGACAGA GATTGCGGTG
GATAAGGTCT TTATTGGCTC TTGCACCAAC AGCCGTATTG AAGATTTACG GGCGGCGGCG
GTGGCTGTGG CGGGTAAAAA GGTGGCTGCA AGCATCAAGC TGGCATTGGT GGTACCCGGT
ACGGGGTTGG TCAAGCAGCA GGCCGAGCAA GAGGGGCTGG ACAAGATTTT TATGGAGGCA
GGTTTTGAGT GGCGCGAACC CGGCTGTTCC ATGTGTTTGG CCATGAACAA TGACGTGCTG
GAGCCTGGGG AGCGTTGTGC TTCGACCTCC AACCGTAATT TTGAAGGGCG CCAGGGTAAG
GACAGTCGTA CCCATCTGGT CAGTCCCGCC ATGGCGGCGG CGGCGGCCAT TGCTGGGCAC
TTTGTGGATA TCCGTAACGG CTAA
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| Protein sequence | MSAQTLFEKI WNAHLIRTDE DGTSLIYIDR HLVHEVTSPQ AFEGLRLAGR KVRHPEATFA
VPDHNVPTKD LAGGIKDPVS KLQVDTLASN CQAFGITEFG VGDLRQGVVH VMAPEQGISL
PGFTMVCGDS HTATHGAFGA LAFGIGTSEV EHVLATQTLM QKKPKTMLIQ VEGELPAGST
AKDIILYIIG NIGTAGGTGY VLEFGGSAIQ ALSMEGRMTV CNMAIEAGAR AGMVAVDEKT
IAYVQGRPYA PKGEAWEKAV AQWQTLKSDE GAPFDAVVTL DARNIAPQVT WGTSPELVAP
VDGCVPNPTD EPNGVKRGAM EKALAYMGLQ AGTPMTEIAV DKVFIGSCTN SRIEDLRAAA
VAVAGKKVAA SIKLALVVPG TGLVKQQAEQ EGLDKIFMEA GFEWREPGCS MCLAMNNDVL
EPGERCASTS NRNFEGRQGK DSRTHLVSPA MAAAAAIAGH FVDIRNG
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