| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1742 |
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| Symbol | |
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| ID | 4482129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2153572 |
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| End bp | 2155209 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639722484 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_865656 |
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| Protein GI | 117925039 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.781609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0184089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAG CTAAGATCTA TTCAGAGAAC ACACCTCAAT GGTACGATGT GGATCGTGCT
AAAGAGATTC TACACGCCTA TAATACGGGA CAGGGCTCTG GACAGCCTGC CGACCGTTTT
GTGGCCTGTT CTGCGGTACC GGCTGGTACC GGTTCGTACC GCGATTTTTC TTACATCGCC
CCAGATCTGC CCGAGTATAT GGCAGACAAC TGCGTGGCCT GTATGGAGTG CGTGCAGAAC
TGTCCTGATT CGGCCATTTG GGGTCGGGTA ATGACGCCTG AGACCCTGGA AGCCGAGTTG
GCCAAAGCCA AGGATGACAC CACCCGCGAT TTGATTAAGG CGCAGATGGT GCAGACCACC
AAGTTTTGGA AAACCTACGA AAAGAAAAAA GAGAAAGAGC CCGATGCCCC AGGGGGTGCC
GAGTTTGGTA TCTTTATTGA TCCCACCAAG TGTAAGGGGT GTGGTGAGTG CGTGGTCGCC
TGTGGTGAGC ATGACGCCCT GAAGATGATC AAAAAGACCA AAGACAACCT GCCCAACTAT
TTTTCCATGT GGGAGTTCTA CAAGAACACC CCTTCCACGC CCGAGGCTTA TATCAATCCC
AAATTGAAGA TTGATATTAT GCTGCGTGAG AACGCCAACC AGTACGTGGG GGGCGCGGGT
TCGTGCATGG GGTGTGGTGA GGCTTCGGTT ATTCGCCAAT TGTTGGCCAT GACCCACGAA
AAAGTCGGCC ATAAATATGG CATCACAGCG GCGACCGGTT GTAACACGGT GTACGGTTCG
ACCTATCCCT ACAACCCGTT CCGGGTGCCA TGGATGAACT CGCTGTTTGA AAACGCGCCG
ACGGTGGCCA TGGGTGTGCG TGCCCATTGG GATCGTACCG GTAAAGAGGA TCATGTGCTC
TGGGCGTTTG GTGGTGATGG TGCCATGTTG GATATTGGCT TCCAGGCCCT TTCGCGCATG
CTGACTTCGG GTATGAACAT CAAGGTTTTG GTGTTGGACA CCCAGGTCTA CTCCAATACC
GGTGGTCAAG CTTCTACAGC GACCTTTATT GGTCAAGAGG CGAAGATGTC GGTCCATGGC
AAGTCGATTC GCGGTAAGAT GGAGCGCCGC AAAGAGATCG GTATGATCGC CATGATGCAT
CCTCACGTCT ATGTGGCGCA GACGGTTGGT CCCATGACCA CCCACTTCTA CAAGAGTGTT
GAGCGTGCTT TGGAGTATAA TGGTCCTGCG CTGATCAACG TTTACACCAC CTGTCAGCCT
GAGCACCAAG TGGCTGATGA CCTCTCTTAC ACCCAAGCGT TGTTGGCTGT GGAGTCCCGT
GCTTTCCCTG TCTTTACCTA TGATCCAGAG GCGGGTGAGA CCATGGCTGA GCGCATGTCT
TTACAGGGGA ACCCCTCTGT GAAGCGCGAT TGGCACCACA AGAAAACCAA GGAGGGTGAG
GAGCAGGTCA ACTTTATCAC CTTTGCCCGT ACCGAGGGTC GCTTCCAGAA GCATTTTGAT
AAGGATGGCA ACCATTCGCC TGTGCTGGAT ATTTCCATGC AAGAGCGTTT GGAAAACTGG
CGCAAGTTGC AGGATCTGGC CGGTGTTTCC AATAGCGATT GGGAAGCCGA GCGTGCGGCG
AAAAAGGCTA AAAAGTAA
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| Protein sequence | MSQAKIYSEN TPQWYDVDRA KEILHAYNTG QGSGQPADRF VACSAVPAGT GSYRDFSYIA
PDLPEYMADN CVACMECVQN CPDSAIWGRV MTPETLEAEL AKAKDDTTRD LIKAQMVQTT
KFWKTYEKKK EKEPDAPGGA EFGIFIDPTK CKGCGECVVA CGEHDALKMI KKTKDNLPNY
FSMWEFYKNT PSTPEAYINP KLKIDIMLRE NANQYVGGAG SCMGCGEASV IRQLLAMTHE
KVGHKYGITA ATGCNTVYGS TYPYNPFRVP WMNSLFENAP TVAMGVRAHW DRTGKEDHVL
WAFGGDGAML DIGFQALSRM LTSGMNIKVL VLDTQVYSNT GGQASTATFI GQEAKMSVHG
KSIRGKMERR KEIGMIAMMH PHVYVAQTVG PMTTHFYKSV ERALEYNGPA LINVYTTCQP
EHQVADDLSY TQALLAVESR AFPVFTYDPE AGETMAERMS LQGNPSVKRD WHHKKTKEGE
EQVNFITFAR TEGRFQKHFD KDGNHSPVLD ISMQERLENW RKLQDLAGVS NSDWEAERAA
KKAKK
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