| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1740 |
|---|
| Symbol | |
|---|
| ID | 4482127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2150656 |
|---|
| End bp | 2151258 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639722482 |
|---|
| Product | DNA replication and repair protein RecR |
|---|
| Protein accession | YP_865654 |
|---|
| Protein GI | 117925037 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00615] recombination protein RecR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000762461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0361777 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCG GTCTGCCGAC ACTGGAACGC AGCATTGAGC TCTTTTCCCG CCTGCCAGGG
GTTGGTCGCA AGAGTGCGCA GCGTATGGTC TACCACCTTC TCAAAGAGGG GGGGCGGGAG
GCTACTCTGC TGGGGCAAGG GCTCTTGGCG CTGAGTGAGC GCATTCACTT TTGTGAGGTG
TGCCATAATT TGGCCGAAGA GGGCTTGTGC GCCATTTGTC AAGATAGTAA ACGAGATCAT
GGCCTCATTT GTGTGGTAGA AGAGCCCGTG GATGTGCTAG CTATGGAGCG TGCTGGGGCT
TATCGAGGTC TCTATCATGT GTTGGGGGGG CGGCTTAGCC CCATGGATGG GATAGGGCCA
GATGCGCTGT ACTTGGACGC GCTGCTCGAG CGGTTGCAGC AAGGCGGGGT ACGGGAGTTA
ATTATCGCCA CCAACCCGAC CGTTGCCGGG GAGGCCACGG CCCACTATAT CACCCAACTG
GCGCAGCCAC TTACCATAGA TATTAGCCGC TTGGCCTATG GTATGCCCAT GGGCGGTGAG
TTGGAGTATT TGGATGAATC CACCCTGTTT CAGGCCCTTC AAGGCCGCAG AGGTGTTTTG
TAA
|
|---|
| Protein sequence | MSSGLPTLER SIELFSRLPG VGRKSAQRMV YHLLKEGGRE ATLLGQGLLA LSERIHFCEV
CHNLAEEGLC AICQDSKRDH GLICVVEEPV DVLAMERAGA YRGLYHVLGG RLSPMDGIGP
DALYLDALLE RLQQGGVREL IIATNPTVAG EATAHYITQL AQPLTIDISR LAYGMPMGGE
LEYLDESTLF QALQGRRGVL
|
|---|
| |