Gene Mmc1_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1739 
Symbol 
ID4482126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2150263 
End bp2150646 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content52% 
IMG OID639722481 
Producthypothetical protein 
Protein accessionYP_865653 
Protein GI117925036 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000243349 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0708671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAAGAT CCAGGCAGGG AGCGTGCAGC AAGGCAACCA TAGCAAATGA TAAGGGTGAC 
GCCGTGAAGG GTTTTGGCAA TATGGGAAAT ATGATGAAGC AGGCCAAGCA GATGCAAGCC
AAGATGGCGC AGATGCAGGA GGAGCTTGCT CAGTTGCAGG TAATCGGCCA AGCGGGTGGC
GGCATGGTGG AGGTTACCAT TAATGGTAAA CAGTCTGTTG AGGGGGTGAA GATTGACCCC
AAGGCGGTTG ACCTAGAAGA TCTAGAAATG CTGGAAGATT TGGTGGCCGC CGCTTTTAAT
GATGCCCAAA TGCGCATGGC ACAGATTACC CAAGAAAAGA TGGCCAAGGT TACGGGCGGC
ATGAATATTC CCGGCCTGTT TTGA
 
Protein sequence
MPRSRQGACS KATIANDKGD AVKGFGNMGN MMKQAKQMQA KMAQMQEELA QLQVIGQAGG 
GMVEVTINGK QSVEGVKIDP KAVDLEDLEM LEDLVAAAFN DAQMRMAQIT QEKMAKVTGG
MNIPGLF