| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1733 |
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| Symbol | |
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| ID | 4482119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2140435 |
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| End bp | 2141829 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639722475 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_865647 |
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| Protein GI | 117925030 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000546701 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0234559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTGCC TTAAAATTTC GAAAAATATC ATTTTTTTCA TGCTTGCTTT AGCGCATTTC
TGCTTAGCTA AGCCAGGTGT GGGTGCAGAG CTTTCTTTAA GCGAACGGGA ATATATACAA
CAGCACGGGC CGTTTACCTT CTGTGTCGAT CCAGATTGGC CCCCCTTTGA GCAGATCAAT
GCGCAAGGGG TGCATGTGGG GATTGCAGCA GATTTGCTGC GTCTGGCGGC GGAGCGTGCT
AAAATTCCGC TTAAATTGGT GGTAACCCAA GAGTGGCAAC AGAGCATCCA GGCTTCCCAG
CGGGGTGACT GCCAAATGCT CAGTTTTCTT AACCAAACCC CCCTGCGTGA CGCATGGTTG
GTTTTTACCG TGCCGATCTT TGTTGATAGA AATGTGATCA TCACCCGCGA AGAACACCCG
TATATTGAGG ATTTGGCGGC GGTTAATCAT CAAACCATGG TGTTGCCCAA AGGAACATCT
ATGGAAGAGC GGGTGCGTAA GGATTTTCCC CAACTGACCA TTTTGCTTGC CGAGTCGGAA
TCGGAAGCCT TTGCGATGGT CTCCAAGAAA AAGGCGGACA TGACCATGCG CTCTTTGATG
GTGGCCATTG ACACCATTAA AAAAGAGGGC TGGTTCAATT TAAAAATTGC GGGGCAAATT
CCCGGTTATG AAAATCACTT GCGGGTCGGT ATCCGAAAAG AGGCCGCCCC GCTCAAGGAT
ATGCTCAATC GGGGTATCAA AGAGATCTCT CTGGCGGAAC GGGCCGAGGT AGCGAATCGG
CATGTATCCA TTCAGGTACA GAGCGGGATT GATTATGGGT TGATGGCTAA AATTATAGGT
GTGTTTTTTC TTATCTTGGT GAGCAACCTA TTTTGGATCT TGCGCCTTAA CCGTGCCAAT
GAGCGCTTAA AACAGCTTTC TCGGACCGAT TTACTGACCG GTCTCCCCAA CCGATCTTTT
CTTAATGAGA CCCTCCAACA TGAGCTTTTG CGTGCTCATC GCAATGGTCG TCCTCTATCG
GTGGTACTTT TAGATATTGA TCATTTTAAA CAGGTTAACG ATCAATACGG ACATTTGGTC
GGCGATCAAG TATTGGTGGA TTTTGCCCAA TTGCTAAAAA AAACCGTGCG TGGTCAAGAC
CATGTGGGGC GCTGGGGTGG CGAAGAATTT TTGATTCTTT GCCCAGAATC AGATTTAAAG
CAAACCCTTG TTTTATGTGA TCGCTTACAC ACGGTTGTGC GGACCCATCA TTTTGCCACG
CAACAGCAAC AAACATTTAG CGCGGGTATC GCCTTGTTTA CCCCGCCAGA GGAGGCGGAT
GGCATGCTCC AGCGGGCCGA TGAGGCACTC TATAAGGCCA AACGTAGTGG GCGCGATCAA
AGCTGCATTG GTTGA
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| Protein sequence | MFCLKISKNI IFFMLALAHF CLAKPGVGAE LSLSEREYIQ QHGPFTFCVD PDWPPFEQIN
AQGVHVGIAA DLLRLAAERA KIPLKLVVTQ EWQQSIQASQ RGDCQMLSFL NQTPLRDAWL
VFTVPIFVDR NVIITREEHP YIEDLAAVNH QTMVLPKGTS MEERVRKDFP QLTILLAESE
SEAFAMVSKK KADMTMRSLM VAIDTIKKEG WFNLKIAGQI PGYENHLRVG IRKEAAPLKD
MLNRGIKEIS LAERAEVANR HVSIQVQSGI DYGLMAKIIG VFFLILVSNL FWILRLNRAN
ERLKQLSRTD LLTGLPNRSF LNETLQHELL RAHRNGRPLS VVLLDIDHFK QVNDQYGHLV
GDQVLVDFAQ LLKKTVRGQD HVGRWGGEEF LILCPESDLK QTLVLCDRLH TVVRTHHFAT
QQQQTFSAGI ALFTPPEEAD GMLQRADEAL YKAKRSGRDQ SCIG
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