| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1694 |
|---|
| Symbol | |
|---|
| ID | 4481714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2095417 |
|---|
| End bp | 2097345 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639722437 |
|---|
| Product | heat shock protein 90 |
|---|
| Protein accession | YP_865609 |
|---|
| Protein GI | 117924992 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0326] Molecular chaperone, HSP90 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000812409 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCG CTACCGAGAC GGAAGTCCGC GAGTTTCAAA CCGAAGTGAG TCAGTTGCTG
GATCTAATGA TCCACGCCCT GTACAGCAAT AAAGAGATCT TTCTACGGGA ATTGATCTCC
AATGCCTCCG ATGCCAACGA TAAGCTGCGT TTCGCCGGGC TCTCTGATGA TAGCCTGTTT
GAAGGAGATA GCGAGCTAAC CATCAAATTG GAATTTGATA AAGAGGCTGG CACCTTCTCC
ATCATGGATA ATGGTATCGG TATGAGCCGT GATGAGGTGA TCTCCAACAT TGGTACCATC
GCCAAATCGG GTACCAAGGA GTTTTTTAAA TCACTCACCG GTGATCAGCA GCGTGATGCC
CACCTGATTG GTCAATTTGG GGTCGGTTTT TACTCCAGCT TTATTGTGGC AGACAAAGTA
ACTTTGGAGA CCCGTAAAGC TGGGGCTGGC GCTGAGCAAG GGGTGCGTTG GATCTCGGCG
GGTGATGGCA GCTACACCTT GGAAAATATG GAAAAAGCCG AGCGTGGTAC CCGTATTACC
CTGCATATGC GCGAGGATGA AAAAGAGTTT CTGGATGCGT GGCGTCTGCG CTCGATTGTG
CGTAAATTTT CTGACCATGT GACGTGGCCG GTGAAAATGC TCGAAGAGCT GCCACCCGCC
CCACCTGCAA AAGAGGGCGA AGAGCCCGAG CCCCCTAAAA CCCCAGAGTG GGAGACGGTC
AATAAAGCCA GTGCGCTGTG GACGCTCTCG AAAAATGACA TCACGGAAGA TGAGTATAAA
GAGTTCTACA AACATGTGGG TCACGATTTT GAAGACCCCA TGGAGTGGGT ACATGCGCGT
ATGGAAGGGC GTATGGAGTA TACCCTGTTG CTCTACATCC CGGGTCGTGC TCCCTTTGAT
CTGTGGGATC GGGATCGTCG CGGTGGGCTG AAGCTGTTTG TGCGGCGTGT CTTCATCATG
GATACCAGTG AAGAGCTGCT GCCCCGCTAC CTGCGCTTTG TGCGGGGTGT GATTGATTCC
GCCGATCTAC CCCTGAATGT CTCGCGCGAA ATATTGCAGC AGAACCGTCA GGTCGAGGCG
ATTAAAAAGG GCTTGGTCCA TAAAGTTTTG GGTATGCTCG AAGAGATGCT CAAAAATGAT
CCTGAAAAAT ATGCCACCTT CTGGAAAGAG TTTGGCATGG TGCTCAAAGA GGGCATGATC
GAAGATTTTG CCAACAAAGA GCGCATCGCC AAACTGTGCC GCTTTAGCAC CACCCATGAC
GGTGAGCGGG TGCCAAAAAT CGCCCTAGCG GACTATGTGG AGCGCATGAA AGAGGGGCAG
GAGGCGATCT ATTATGTAAC CGGCGAGAGC TTTGAAGCCT GCTCATCTAG CCCCCACTTG
GAGATCTTCC GTAAAAAAGG CATTGAGGTG CTGCTGCTTT CAGACCGGGT TGATGAGTGG
ACCGTTACTC ATTTGACCGA GTTTGACGGC AAGCCTTTAC AGGCCATCAC CAAGGGTGAG
TTGGATCTCT CCAAATTTGC AGGTGGTGAA GAAGAAGCCA AAGATGAAGA GGCTGAAAAA
GCGCAGGAAG AGGCGCTTAA GCCGATCACC GAGCGGATGG CTAAAGTACT GGAAGGTCAG
GTTAAAGAGG TGCGATTAAG TCACCGTTTG ACTGAATCCC CCGCCTGTCT GGTGGGGGAT
GCGCACGATA TGAGCGCCAC CCTGGAGCGC TTGCTCAAGG AGGCCGGTCA AGAGGTGCCC
ACCGCTAAGC GTATTTTGGA GATCAACCCC AGCCATGCCC TGCTCAAGCG TCTAGCCGAT
GAGGCTGACG AAGAGAAGTT TGGCGAGTTG ACCCATGTGT TGCACGATCA AGCGCTGCTC
GCGGAGGGGG GGCAACTGAA AGATCCCAGT CAGTTTGTCA AACGTCTAAA TAAGTTGTTG
ATGGGTTAA
|
|---|
| Protein sequence | MSAATETEVR EFQTEVSQLL DLMIHALYSN KEIFLRELIS NASDANDKLR FAGLSDDSLF
EGDSELTIKL EFDKEAGTFS IMDNGIGMSR DEVISNIGTI AKSGTKEFFK SLTGDQQRDA
HLIGQFGVGF YSSFIVADKV TLETRKAGAG AEQGVRWISA GDGSYTLENM EKAERGTRIT
LHMREDEKEF LDAWRLRSIV RKFSDHVTWP VKMLEELPPA PPAKEGEEPE PPKTPEWETV
NKASALWTLS KNDITEDEYK EFYKHVGHDF EDPMEWVHAR MEGRMEYTLL LYIPGRAPFD
LWDRDRRGGL KLFVRRVFIM DTSEELLPRY LRFVRGVIDS ADLPLNVSRE ILQQNRQVEA
IKKGLVHKVL GMLEEMLKND PEKYATFWKE FGMVLKEGMI EDFANKERIA KLCRFSTTHD
GERVPKIALA DYVERMKEGQ EAIYYVTGES FEACSSSPHL EIFRKKGIEV LLLSDRVDEW
TVTHLTEFDG KPLQAITKGE LDLSKFAGGE EEAKDEEAEK AQEEALKPIT ERMAKVLEGQ
VKEVRLSHRL TESPACLVGD AHDMSATLER LLKEAGQEVP TAKRILEINP SHALLKRLAD
EADEEKFGEL THVLHDQALL AEGGQLKDPS QFVKRLNKLL MG
|
|---|
| |