Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1609 |
Symbol | |
ID | 4480870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1990347 |
End bp | 1991384 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639722351 |
Product | twitching motility protein |
Protein accession | YP_865524 |
Protein GI | 117924907 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.409997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGA ACGATCTGCT CACTTTTATC GTCCAGAATG GCGGCTCAGA TCTCCACCTC TCTGCCGGGC TGCCCCCCAT GGTGCGGATT GATGGGGATG TGCGGCGCAT CGACGTACCC ACCCAATCCA GTGACGATGT GCTGGCTATG CTGCACGGTA TTATGAACGA TGTGCAGAAA CAGAGCTTTA CCGAAACCCA TGAATCCGAC TTTTCATTTG CGTTGGAGGG GGTTGCCCGT TTTCGCGTCA ACGCCTTCAT GCAGCAACGG GGGGTGAGCG CGGTACTGCG GACCATTCCT TCCGAGGTGC TCACCCTGGA ACAGCTGGGT GCCCCTGAGA TTTTTAAGGA GATTGCCGCC ACCCCACGGG GCATTGTATT GGTCACGGGC CCCACCGGTT CGGGCAAATC CACCACACTG GCGGCTATGG TGGATTATAA AAACAGTACC GATTATGGGC ACATTCTCAC GGTGGAAGAC CCCATCGAAT TTGTACACCA GTCAAAAAAG AGTCTGGTTA GCCAACGCGA GGTGCATCGC GATACCCTAA GTTTCACCAA CGCCCTCCGG GCTGCCCTAC GGGAAGATCC CGACACCATC TTGGTTGGGG AGATGCGGGA TTTGGAGACC ATTCGTCTGG CTCTAACCGC CGCCGAGACC GGTCACTTGG TGTTTGGTAC CCTGCATACC AGCTCCGCGC CCAAGACGGT GGATCGTATT GTGGACGCCT TTCCTGCTGC GGAAAAAGAT ATGATCCGCA CCATGTTATC CGAATCCCTT AAAGCGGTGA TCTCGCAAGT GCTGTTAAAA AAACGCGGCG GTGGGCGGGT TGCGGTACAC GAAATTATGC TCGGCACGGG TGCCATTAAA AACCTGATTC GGGAGAATCA GGTTGCCCAG ATGTACTCAT CCATTCAAAC AGGCCGCAAG CTAGGCATGC AAACTTTGGA ACAAGGTTTG CAAGAGTGCA TACAGAAGGG TCTCATCACC CGCGAGCAGG CCTACGAAAA GGCCAACGTC AAAGACCAGT TCAAATAA
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Protein sequence | MELNDLLTFI VQNGGSDLHL SAGLPPMVRI DGDVRRIDVP TQSSDDVLAM LHGIMNDVQK QSFTETHESD FSFALEGVAR FRVNAFMQQR GVSAVLRTIP SEVLTLEQLG APEIFKEIAA TPRGIVLVTG PTGSGKSTTL AAMVDYKNST DYGHILTVED PIEFVHQSKK SLVSQREVHR DTLSFTNALR AALREDPDTI LVGEMRDLET IRLALTAAET GHLVFGTLHT SSAPKTVDRI VDAFPAAEKD MIRTMLSESL KAVISQVLLK KRGGGRVAVH EIMLGTGAIK NLIRENQVAQ MYSSIQTGRK LGMQTLEQGL QECIQKGLIT REQAYEKANV KDQFK
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