| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1585 |
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| Symbol | |
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| ID | 4482010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1954948 |
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| End bp | 1957941 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639722327 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_865500 |
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| Protein GI | 117924883 |
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| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2703] Hemerythrin |
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| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0506564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCA GTGTCAAAAT GGTATTGATG GTATTTGTTC TGGTCTCTTT GGTGCTGCTG
CTACAGGGCT GGCTGTCAGG CTCTATGGTG CTGACGGTGT TAGAAGAGAA TATGCAGGGC
AAACTACAGA CAGCCATGAA AGAGTCGGCC AAGCTGGTGG AAGCGCGGGT TAAACAGACC
GGTGAAGATG TTGCCGTGAT GCAGGCTCAC CGGGATATAG AAAATTTTTT AACCTCATTA
GTCTTTGAAG ACCTGGATGG CATGACGGAG GCATCCTCCA ATCTGGACCT CTTTTTTCAG
CGTGTCTACC AAGCGAAACC CCGCTACAGC ATTATCCAAC TGGCCTCCAC GAAGGGGAAG
CCCTATTTGC AATTAAGTGA GGGTAAGCGG GTTGAGCAAT ATTACGCCTT TGATGTGGCG
AGTATGTTGG CCGAGATGAA GGCACAGGAT AAAAAACGCA TCCATAGGGC CCAATTGACA
AATGGCCATT GGGGCCTCTA TACCGCAGCG GCTCTGGAAG TGGAGGGTCG GGTAGAGGGT
ATCTTGCTGC TCTATCAACC CATCTCGGCC TTGGTCAAAG AGCTCACTGC TGGCTTGCAG
GCCGAACAGG TGGTGGCCTC GGTCATCGGC GATAATAGTT TGGTGGGTAA AACGGCTGGC
ATGGAGGGTG CGCTGCAACA AAAAATGATG GCTGGCAAGC TGGCAGGCTG GGTGACGCAC
CGTATTGAAA TACCCTCACT TAAATGGGTT ATGGTGGGCG GGATCGAACA GTCGGGTGCC
ATGGCGGTGG TGTGGAAGCT CTCTTTAACC GCCTTCATGG CCGCCGTGGT GTTGGTGGTG
CTGATTTCCC TATTTACCCG TAACACCATT ACCCGGCGCT TGGCCCGTAT TGGTCGCTCC
ATCGGGGGGC TGGCCGATGG CAACCTGACC GAACGGATCA CCATTTCTGA AAAACCTGAT
GAAATTGATG AAATCGCCAT TTTTGTCAAT CAGTTGGCCG ATAGCTTGAC CTTTAGTATC
CGCACCATCG GTATGCAGTC CAGTACCGTG ACCGCTTTTA TTCAAGAGGT GTTGGGCATT
AGCCGTACCC TAGGGGTTAA CTCGGAAAAG GTGAATCAAT TTTCCCATGT GTTGGCCGAA
CAGAACGACT CCTTAACCCA GGCGATTGCC AACATCAAAG ATCTCTCCAA CCGTACCGCG
AGCCGCATGG GCAGCCTGAC CAACGGGGCC AATTCGGTGG CGGAAAATAT GAACACCATC
GCTGGAGCAG CCGAACAAGC CAGCCAAAAT GTGAGCACCA TGGCTTCGGC CGCCGAAGAG
ATGACCGCTA ACGTGGCTGG CGTCAACCAA TCCCTGGGGG TAATGAACCG ATCCGTTTCT
CAGGTCTCTC ATGCGGTTGG CGAGGTTAAA TCTGCTTTGC AGAGGGTCAA AGGGCAGTGT
ACTCAAGCCA CCAACCTGTC ACAGGCCGCC AATGGTCACG CCAACCATAC CATGGAGGTC
ATGACAAAGC TGACCCGCTC CGCCCAAGAG GTGGGTAAAG TGGTGGACAT TATCAATAAC
ATTGCCGAAC AGACCAATAT GCTGGCCTTG AACGCCTCCA TCGAGGCCGC CGGGGCGGGC
GAAGCGGGTA AAGGGTTTTC GGTCGTAGCC AATGAGGTCA AAGAACTCGC CTTTCAAACC
AGTGAAGCCA CCAAGATGAT CGGTACCCAG GTGGATGAAA TTCAGGATAA TACCCGGGCA
GCTACCCGTG CGGTTAATGA GATCTCCAAC ACCATTACTG CCATCAACCA ATCCAACGCC
GAGATCTCAA ACTCGGTTGA AGAACAAGAT CATGCGGTGC AGGCAATCGC TCACGCCATG
CAGGAGGTCA CCCACGGCAA CCAAGAGGTG ACACGCAACG CCCAGGAGTT GGAAATCGCG
GTTCAAGAGG TTGCCCAAGC CTCTGGTGAG GTGGCGGCAG GCTCTCAAGA GATCGCGGCG
GCATCGGCCA ATGCCGCCTC GGCGGCTCAG GAGATGTCTG GTCAAGCGCT GGAGGTCAGT
CACTTTGCCG ATGAAACCCT GAAAACGGTG GATTCCACCG ATGAAACCAC GCGCATCTTC
CATGACAAGG TCGAGGAGTC TTTGGGGTTG GCGATGGCGA TGCATGGACA CGTCAACCAC
TTTGCCGCGC TGCGCGATGT GGCCCGCTCT ATCAGCGATG GTTTGTGTGC TGCTCAGTGC
GCTTTTGATA TTGGTGATGA GCTGTTTGAT ATGCGGGATC TTAAAGAACG CTATATGGCC
CTAATGGGGG CGCTGGAGAC AGCCATTCAT AGCCAGACAC CTCTGACCGA ATCCCCTGTG
CCAGCACCAG AGTCGGTGCC CTTTTTGCGT TGGTTGGGTA AGCAGCGCGG CATATTAAGC
TGGTTCCCCA ATCTGGCAGA GTTGGAGCAG TCGGTCAAAG CTATGCACAC CCTAGGGGGG
GAAATTGTTG AACTGACCCG TCGCCAGGAT TTTAATGCGG CCCTTACCAA AATGGCCGAT
TTTCACAATC AGCGCAGCAC CTTCTTTCGC CATGCCAATG ATCTATACTT GGGACAGCTT
GGGCAGAGCA TAGATCGCAG TACCTTCCTG AAATGGAATG ATGGCTACAG CACGGGTAAT
GCCCAGATTG ATGGGGAACA CCAACAGTTG ATGAACATTA TCAACGAACT CTATATCAAG
TTGTGGAGCG GTGAAAAAAA TCCCGACTAT AACCCTATTC TGCTCCGGCT GGATGGCTAT
ACCCGTGACC ACCTAAGACG GGAGGAAGAA CTGCTGGCCA GCAAGTCGGC TCCAGGGTTG
GATGGACATA AATCGATCCA TCGAGAGTTC ATTAAAAAGC TGGAAGCGTT TAAATTGGCT
TTTGATCAAG GCAATGTAGG GCTGAGTATG GAGATGATGG CCTTTTTGAA AAATTGGCTC
AGCCAGCACA TTGTTAAGGT GGATAAAGTG ATCTTTAAAA AGATTGGCTA TTAG
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| Protein sequence | MKLSVKMVLM VFVLVSLVLL LQGWLSGSMV LTVLEENMQG KLQTAMKESA KLVEARVKQT
GEDVAVMQAH RDIENFLTSL VFEDLDGMTE ASSNLDLFFQ RVYQAKPRYS IIQLASTKGK
PYLQLSEGKR VEQYYAFDVA SMLAEMKAQD KKRIHRAQLT NGHWGLYTAA ALEVEGRVEG
ILLLYQPISA LVKELTAGLQ AEQVVASVIG DNSLVGKTAG MEGALQQKMM AGKLAGWVTH
RIEIPSLKWV MVGGIEQSGA MAVVWKLSLT AFMAAVVLVV LISLFTRNTI TRRLARIGRS
IGGLADGNLT ERITISEKPD EIDEIAIFVN QLADSLTFSI RTIGMQSSTV TAFIQEVLGI
SRTLGVNSEK VNQFSHVLAE QNDSLTQAIA NIKDLSNRTA SRMGSLTNGA NSVAENMNTI
AGAAEQASQN VSTMASAAEE MTANVAGVNQ SLGVMNRSVS QVSHAVGEVK SALQRVKGQC
TQATNLSQAA NGHANHTMEV MTKLTRSAQE VGKVVDIINN IAEQTNMLAL NASIEAAGAG
EAGKGFSVVA NEVKELAFQT SEATKMIGTQ VDEIQDNTRA ATRAVNEISN TITAINQSNA
EISNSVEEQD HAVQAIAHAM QEVTHGNQEV TRNAQELEIA VQEVAQASGE VAAGSQEIAA
ASANAASAAQ EMSGQALEVS HFADETLKTV DSTDETTRIF HDKVEESLGL AMAMHGHVNH
FAALRDVARS ISDGLCAAQC AFDIGDELFD MRDLKERYMA LMGALETAIH SQTPLTESPV
PAPESVPFLR WLGKQRGILS WFPNLAELEQ SVKAMHTLGG EIVELTRRQD FNAALTKMAD
FHNQRSTFFR HANDLYLGQL GQSIDRSTFL KWNDGYSTGN AQIDGEHQQL MNIINELYIK
LWSGEKNPDY NPILLRLDGY TRDHLRREEE LLASKSAPGL DGHKSIHREF IKKLEAFKLA
FDQGNVGLSM EMMAFLKNWL SQHIVKVDKV IFKKIGY
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