| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1574 |
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| Symbol | |
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| ID | 4481999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1938840 |
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| End bp | 1939742 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639722316 |
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| Product | HflC protein |
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| Protein accession | YP_865489 |
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| Protein GI | 117924872 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000132487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTTA AAGATCAAAA TACACTAACC GGTGGTGTGC TGTTGTTGGT GGCGGGCCTA
CTGTTTGTGC TGTCGATGTC GGCTTATACG CTGCACCAGA CGGAGCAGGC GCTGGTGTTG
CAGTTAGGGC GTCCAGTGGC GGTGATAACA GAGCCGGGCT TGCATTTTAA ATTGCCGCTT
ATTCAAAATG TTAAACGTAT GGAGACGCGG CTTCTCAACT ACGATCAAGA TCCTACCAGC
GTGCTTTCTA AGGACAAGAA AAACCTGACT GTGGATAACT ATGCCCGGTG GCGTATTACC
GATGCATTGA AATATTATCA GGTGGTGGGC AATGAGTACG AGGCCAACAA ACGCTTGAAG
GATGTTATTG ATTCGAGCCT GCGTAAGGTG TTGGGTCAGT ACGATATGAT GGAGATCGTC
TCTGGACAGC GCAGCAAATT GATGACCGCC ATTGCGGATG AAGCCAATAA GCAGGCGGTA
CAGTTTGGTA TTACCATTGC TGATGTACGT ATTAAACGCA CCGATTTGCC GAAAAAGAAC
GAGGAGTCGG TTTTTTCGCG CATGCAGACC GAGCGTCAGC GGCAGGCCAA GCAGTATCGC
GCGGAAGGGG AGGAAGAGGC CCGTAAGATA CGCTCCCAGG CAGATCGTGA GCGTGAGGTG
ATTTTGGCAA AGGCCTATGA GAAATCGGAA GCGTTGCGTG GTGAAGGTGA TGCAGAATCG
GCCCGGATCT ATGCGGATGC TTTTAATAAG GATCCTGAGT TCTACCGCTT TTTGCGTACG
TTGGATGCCT ATAAACGCTC CATTTTAGAG GGCAACACCA CGTTGGTTCT CCCCCCCGAT
GGTTTTTTTG GGGGTTTAAA GGGGGAAGGC TTTAACACTA AAGACCCCAT GGGTATGCAG
TGA
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| Protein sequence | MNVKDQNTLT GGVLLLVAGL LFVLSMSAYT LHQTEQALVL QLGRPVAVIT EPGLHFKLPL
IQNVKRMETR LLNYDQDPTS VLSKDKKNLT VDNYARWRIT DALKYYQVVG NEYEANKRLK
DVIDSSLRKV LGQYDMMEIV SGQRSKLMTA IADEANKQAV QFGITIADVR IKRTDLPKKN
EESVFSRMQT ERQRQAKQYR AEGEEEARKI RSQADREREV ILAKAYEKSE ALRGEGDAES
ARIYADAFNK DPEFYRFLRT LDAYKRSILE GNTTLVLPPD GFFGGLKGEG FNTKDPMGMQ
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