| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1554 |
|---|
| Symbol | |
|---|
| ID | 4483150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 1914123 |
|---|
| End bp | 1915607 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639722296 |
|---|
| Product | D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase |
|---|
| Protein accession | YP_865469 |
|---|
| Protein GI | 117924852 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.431302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATA AACGTAGCGA TGTGCTACAC GCGGTAGAAA CCGCCTTCTA CCAAAAACAT
GTTCTGGTGG TCGGGGATCT CATGTTGGAC CGCTATCTTT GGGGGGATGT TACCCGCATC
TCGCCCGAGG CACCGGTACC GGTGGTACAT ATGCAGCGCG AAAGCCACCG CTGCGGGGGG
GCGGCCAACG TTGCCAGCAA TTTAGCCAAA CTGGGGCTAC ACACCAGCAT TGTAGGGTTT
GTTGGTGAGG ACAGCGACGG CCAAGTGCTC ATCTCTGCCC TGCAAGAGAG CGGTATTGAC
ACCCACGGCA TCCTGCCCTT GGCGGGGTGG TCAACCATCA CCAAAACCCG TGTCATCGGT
GGCCACCAGC AAATTTTGCG CATGGACCGC GAGACCCCTC TGGCTGACAC TGCCCACGCC
AGTCAATTGC TCCACCAGCA AGTAATGCCC ATGTTGGAGG GAGAGCAGCG CCCCCACGTG
ATCATTCTCT CCGACTATGC CAAGGGGGTA CTCTCCTTTG AGTTGTGCCA AGCGCTGATT
GTGCGGGCGC GCAACTTGGG CATTCCGGTA TTGGTGGACC CCAAGGGGCG TGATTATGCC
CGCTACCGCC ACGCCACCGC CCTCTCCCCC AACCGGGGTG AACTGCGTGG CGTGACCGGG
GTTGAGGATG GCGACCTAAA CACCCTGTTG GATGCAGGAG AGTCCTTGCG TCAATCCCTG
GATGTGGCCT TTCTAGCCGT GACCCTCTCC GAGCAAGGCA TCGCCTTGGT GGATGGTTCG
GAGCATCCCC GCCGTATCCC CGCCATGGCG CAAGAGGTCT ATGATGTCTC CGGTGCGGGG
GATACCGTCA TCGCGACCCT TGGGGCGGGC TTGGCGGCAG GCTTAACCCG CTTGGATGCC
CTGCATCTTG CCAACTTGGC CGCCGGGGTG GTGGTAGGTA AGTTGGGCAC CGCTGCCATT
GATCTTAATG AGCTGCGTGG CGCCCTACTC ACCGATGCAA CCTATGAGCA GTCGGACAAA
ATCGCCAACT GGGCCCACGC CAAACAGCAG ATCGCGCGCT GGCACGCCCA AGGGGAGAAG
GTGGTCTTTA CCAATGGCTG TTTTGATCTT CTGCATGCTG GGCATGTCAC CTATTTGGAG
CATGCCCGCC GCTTGGGTCA GCGCTTGGTG TTGGGGCTTA ATACCGATGC CTCGGTGAGC
CGCCTCAAGG GGCCGGAACG CCCCTTGATT CAAGAACAGG ATCGGGCCCG CGTGTTGGCC
GCTTTGGCTG CGGTGGATTT GGTGGTACTG TTTGAGCAAG ATACTCCGCT GGAGTTGATT
GAACAACTAC GCCCGGACAT ACTGGCCAAA GGGGCGGACT ATCGCGAAGA TCAGGTGGTG
GGGGGGGATT TGGTCCGTCG TTGGGGGGGC CGTGTGGCCC TGGTGCAACT GGTGCAAGGC
AGAAGCACCA CCGGTATTGT GCAGCGCATC TCCGCGCAAA AATAG
|
|---|
| Protein sequence | MFDKRSDVLH AVETAFYQKH VLVVGDLMLD RYLWGDVTRI SPEAPVPVVH MQRESHRCGG
AANVASNLAK LGLHTSIVGF VGEDSDGQVL ISALQESGID THGILPLAGW STITKTRVIG
GHQQILRMDR ETPLADTAHA SQLLHQQVMP MLEGEQRPHV IILSDYAKGV LSFELCQALI
VRARNLGIPV LVDPKGRDYA RYRHATALSP NRGELRGVTG VEDGDLNTLL DAGESLRQSL
DVAFLAVTLS EQGIALVDGS EHPRRIPAMA QEVYDVSGAG DTVIATLGAG LAAGLTRLDA
LHLANLAAGV VVGKLGTAAI DLNELRGALL TDATYEQSDK IANWAHAKQQ IARWHAQGEK
VVFTNGCFDL LHAGHVTYLE HARRLGQRLV LGLNTDASVS RLKGPERPLI QEQDRARVLA
ALAAVDLVVL FEQDTPLELI EQLRPDILAK GADYREDQVV GGDLVRRWGG RVALVQLVQG
RSTTGIVQRI SAQK
|
|---|
| |