Gene Mmc1_1492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1492 
Symbol 
ID4483606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1823969 
End bp1825843 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content55% 
IMG OID639722234 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_865407 
Protein GI117924790 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.411872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00494446 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAATTTAG GTATTCGTGG CAAGCTGTTC CTGCTCTCCT TTATCCTGAT TTTGCTGGTG 
GGTGCCTCGG TGGGCATGCT GCTGGAACTT GCGCTGGGCA ACTGGTTGCA AGCGCAAATT
CGCGGTGAAT TAGAGAGCTA TGCGCGGTTG GGGGTGGCGA GCCTGATGGA TCAACGGCTC
GACTATACCA TGACCGGGTT GGATGCGCTG GCCGATCATT TGGGGGAGAT TACCCAGTCG
CGTGTCACCA TTGTGGATGT GGATGGTCGC GTGCTGGGGG ATGGACGGGT GGCTCTGGCA
GCTTTACCGA GTGTTGACAA TCACGCCAAA CGTCCCGAAA TTGTGCAAGC CTATAAAGAG
GGGAGCGGGG CTTCCATTCG CTACTCGGCA ACCCTAAAGA CCGATATGTT CTATGTAGCC
CGGACTTATC ATCTCAAAGA TGGGCAGATG GGTGTGTTGC GGGTTGCCAA GCCGATGTCG
CAGTTGGCTC CCATTCGTGA GCGTCTGCGC TTAATGTTGG TCTTGGCGGG CATTTTGGCG
GTGTTGGCGG CTATGGGGGT CAGTTCCCTA GCGGCCCATT TTAGTACCCG CCGTTTCCGT
AAATTGATGG CCCAGGTTCA CGCCATTTCC AGTGAAGCCC TGAGCAGTTC GGTCGCTCCG
GTAGAGATGC AGCCGGGTGA TGAGTTGGGT CTATTGGGGG CCTCTTTCCG AAGTATGGCG
ATGGAGCTGC GGCGCAATGT CTCGTCGGTT ACACGGGAGC GACGTCTGTT GCAAGGGGTG
CTTCAGGGGA TGGCCGATGG CCTGTTGGTG GTGGATGATC ACAGCCGGGT AGTCTTGAGT
AACCCTCCGG CGGAGACACT GCTGGGGGTG GGCGAAGAGC ATGTGGGTGA GACCCTGCAA
AGTGTGCTGA GCTCACAATG TTACCAGCAG CTTAGTCAGG TGTTGCAGGT GGAAAACAAT
CTGCCGGGTA GTGTGGAACT CACGCTGACT TTTGGTGACG AAAGCCGTTT TGTGCAGGCG
CAGTGGACGC CGATGGAGGG CGAGCGCGGC TATATTATTG TGTTTCATGA TAATACCATA
CTGCGTAGGC AGGAGCAGAT TCGGCGGGAT TTTGTGGCCA ATGTCTCCCA CGAATTACGT
ACCCCCATTA GCATTCTTCA GGCGAATGCG GAAACACTGC TCAATGGTGC CCTTAATGAT
AAAGCCTATG GGGTGCAGCT GGTCAATGCC ATTGAGCGGC ATGCTATTCG GCTGTCGCAA
ATTATCTCCA AACTACTGGA TCTGGCCCGT CTGGAGTCCA ACGAGCTTAT CTTTAAGAAT
GAACCGCTGA ATATAAGCTC CATTGTCAAC AGTGTGCAGG AGCATATTAC CCCGCTGGCC
CAGGAAAAAA ATATTACCTG CTGGTCTATG ATTAAGCCCG AAGTGGTCTG TATGGGGGAT
CGTGAGGCGG TCGAGGAGGT GCTTAGCAAT CTGGTTTCCA ACGCGGTGAA GTATATACCG
GCGGGGGAGC AGATCTCCAT TACCTGTAGC GAGTTGCAAG GGTTTAACCG GATTGAGGTA
AGCGATACCG GTGCAGGGAT TGATGCCAGC CACCATAGCC GCGTATTTGA ACGTTTTTAC
CGGGTGGATA AGGGGCGTTC TCGGGATATG GGCGGCACAG GGTTGGGGCT CTCGATTGTT
AAGCAGATGG TGCGTAAGAT GGGCGGGGAT GTGGGGGTGG AGTCGGTCAA TCCCCATGGT
TGCCGTTTTT GGTTTACGCT ACCTAAAAAG ATGGAAGGAC AACGTGTTAC CCGCCCCGCA
ACCGGCCATC CTGCGATTTT GCCGGACGAT GCGCCGTTGG ATCTTAAAGG ACATGAAGTG
GGTCGCCACC CCTAG
 
Protein sequence
MNLGIRGKLF LLSFILILLV GASVGMLLEL ALGNWLQAQI RGELESYARL GVASLMDQRL 
DYTMTGLDAL ADHLGEITQS RVTIVDVDGR VLGDGRVALA ALPSVDNHAK RPEIVQAYKE
GSGASIRYSA TLKTDMFYVA RTYHLKDGQM GVLRVAKPMS QLAPIRERLR LMLVLAGILA
VLAAMGVSSL AAHFSTRRFR KLMAQVHAIS SEALSSSVAP VEMQPGDELG LLGASFRSMA
MELRRNVSSV TRERRLLQGV LQGMADGLLV VDDHSRVVLS NPPAETLLGV GEEHVGETLQ
SVLSSQCYQQ LSQVLQVENN LPGSVELTLT FGDESRFVQA QWTPMEGERG YIIVFHDNTI
LRRQEQIRRD FVANVSHELR TPISILQANA ETLLNGALND KAYGVQLVNA IERHAIRLSQ
IISKLLDLAR LESNELIFKN EPLNISSIVN SVQEHITPLA QEKNITCWSM IKPEVVCMGD
REAVEEVLSN LVSNAVKYIP AGEQISITCS ELQGFNRIEV SDTGAGIDAS HHSRVFERFY
RVDKGRSRDM GGTGLGLSIV KQMVRKMGGD VGVESVNPHG CRFWFTLPKK MEGQRVTRPA
TGHPAILPDD APLDLKGHEV GRHP