Gene Mmc1_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1485 
Symbol 
ID4483098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1815706 
End bp1816218 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content52% 
IMG OID639722227 
ProductCheW protein 
Protein accessionYP_865400 
Protein GI117924783 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.02816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT TAGAACAGCT ATTGGAAAGC AAAGGGCATG ACCACACAGA GATTGTAAAT 
GTGGAGGATC CCCAAGTAAA ATTGGTGATT TTTGCCCTGC ATGATCAGAT CTTTGCCTTT
CCGGGTGAGC AAATTCGGGA AATCGTTACC GATCTTGAGA TTTTTTATGT ACCGGGTTGC
CCCCGTTCCA TGGCCGGCGT GGTCAATATT CGGGGCAATA TTGAGTCGGT TCTTAACTTG
GACCATCTGT TGGGCATTCA GCGGGAGCCG CCGCCGCGTC TCACACTGCT GATTGGCGAA
GGGGATGGTT TGCGCAGCGG GTTGCGGGTT GATCAGGTGT TGGATGTGCT GGATCAGCCC
ATAAGCGGCA TTCAACCCCC GTTAGAGACG GTTTCAGAGC AGATACGCCC CTTTGTGACG
GGTATTCTGC ACTATCGGCA ACAGCCGGTG ATGGTGTTGA GTTTGGTGCC GCTGTTTGCC
CACTACCGGC ACACCATGAA ATATCCGGGC TAA
 
Protein sequence
MSDLEQLLES KGHDHTEIVN VEDPQVKLVI FALHDQIFAF PGEQIREIVT DLEIFYVPGC 
PRSMAGVVNI RGNIESVLNL DHLLGIQREP PPRLTLLIGE GDGLRSGLRV DQVLDVLDQP
ISGIQPPLET VSEQIRPFVT GILHYRQQPV MVLSLVPLFA HYRHTMKYPG