Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1485 |
Symbol | |
ID | 4483098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1815706 |
End bp | 1816218 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639722227 |
Product | CheW protein |
Protein accession | YP_865400 |
Protein GI | 117924783 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.02816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATT TAGAACAGCT ATTGGAAAGC AAAGGGCATG ACCACACAGA GATTGTAAAT GTGGAGGATC CCCAAGTAAA ATTGGTGATT TTTGCCCTGC ATGATCAGAT CTTTGCCTTT CCGGGTGAGC AAATTCGGGA AATCGTTACC GATCTTGAGA TTTTTTATGT ACCGGGTTGC CCCCGTTCCA TGGCCGGCGT GGTCAATATT CGGGGCAATA TTGAGTCGGT TCTTAACTTG GACCATCTGT TGGGCATTCA GCGGGAGCCG CCGCCGCGTC TCACACTGCT GATTGGCGAA GGGGATGGTT TGCGCAGCGG GTTGCGGGTT GATCAGGTGT TGGATGTGCT GGATCAGCCC ATAAGCGGCA TTCAACCCCC GTTAGAGACG GTTTCAGAGC AGATACGCCC CTTTGTGACG GGTATTCTGC ACTATCGGCA ACAGCCGGTG ATGGTGTTGA GTTTGGTGCC GCTGTTTGCC CACTACCGGC ACACCATGAA ATATCCGGGC TAA
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Protein sequence | MSDLEQLLES KGHDHTEIVN VEDPQVKLVI FALHDQIFAF PGEQIREIVT DLEIFYVPGC PRSMAGVVNI RGNIESVLNL DHLLGIQREP PPRLTLLIGE GDGLRSGLRV DQVLDVLDQP ISGIQPPLET VSEQIRPFVT GILHYRQQPV MVLSLVPLFA HYRHTMKYPG
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