| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1467 |
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| Symbol | |
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| ID | 4481522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1789135 |
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| End bp | 1790946 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722208 |
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| Product | ABC transporter related |
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| Protein accession | YP_865382 |
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| Protein GI | 117924765 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000245046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.820859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCCCC CGCCCATCGA AGCCGTTACC GAAGAGACCC GTTATGGTGC CTTTTTGGAT
CTGCATCTGT TACGGCGTTT TTTCCGTTAC GCCAAACCCC ATACACGCTG GGTCTTGTTG
GCCCTCGCCA TTTTGCCCTT GAACACCCTT ATTCAGTTAG GGCAACCCCT ACTGTTAAGG
CAAGCGGTGG ATGAACACCT CATCCCCGGC ACGCTGGATG GCTTTGCTGG ATTGCTGGTT
GCATTGGGCG TTTTGTTGTT GCTACAAGCC TTGGCGGGCT ATGGCATGTC GGTGGTTAAT
GCCACCCTGG GGCAGCGGGT GGTGCGAGAT CTGCGGCGCG ACCTGTTTGG CCATTTATTA
CGCTTGGATG CCAGCTATTT TAATAAACAC GCCTCGGGTC GTACCACCAA TCGCGTTACC
AATGATGTGG AGGCGGTTAG CCAGATGGTC TCCGCGGGTT TAATCCACCT TATTGGCGAT
GTGGTGCTGC TGACGGGCAT TCTCATCAGC ATGGCGCTGT TAGCCCCAAC CCTTTCTCTC
ACGCTGGTTG TGGCACTGCC CCTGATTGTG GGGGGAACCC TGCTGGCCGC CAAAAAAAGC
CGCCTCGCGC AACGGGAAAA CCGCTTGATG CTGGCCCGCA TGGCCAGCCG CCTGACAGAA
GAGATTGAAG GACAGCAAGA GGTACGACTG TTTCATCGGC AGCAGCGCAA CCATGCGGAA
TTTGAGCAGC AAAATCAGGT TTATTTTACC TCATCACTGG TGAGCAACAC TTGGGAAGCC
TTCCAATTTA GCTTTATTGA TGCACTCTCT ACCGTGGTTA TCGCAGCGCT ATTTTGGATT
GGCGCCAGCA TGAGCAGCGC CGACGGCGTG ACCATTGGCA CCCTGGTGGC TTTTATTGAT
TATGTGCGCC GGGTTTTTCA ACCGGTACGG GATCTATCGG GGAAATTTAC CACCATGCAG
GCAGCCATGA CCGCGTTGGA ACGTATTTTT GGCCTTTTGG ACAGCAAACC ACAGATCACG
GACGCCCAAG TTAACCATGC CTTCACCCTG CCCGCCCGCC CCCGCTTGGT GATGCAGGAG
GTCGGCTTTG CCTATGGCGA GCAGCCCATA TTAAAAAATC TCTCGCTGAC CGTGGAACCC
GGTGAACAGG TCGCAGTGGT TGGCCCCACC GGGGCCGGTA AAAGCACCCT CATTAAACTG
CTCAACCGTA CCTACGAACC CCAACAGGGG ATCATTCAAC TGGGCGGTCA AGATCTGCAA
AATATTCCCA TGGCTACTCT GCGTCGTACG GTGGGGGTGG TCCCTCAAGA GACCTTTTTA
TTTAGCGGTA CCATTGCTGA GAACATTCAC TTGCGCGACC CTTCTATCCC ACAAGCGGCG
GTGGAGGAGG CCGCCCACAA AACCGGCGCC ATGGCTTTTA TCGCCGACCT GCCTGAAGGC
CTGAATACCC GATTGACCGA ACGGGGGGGC AATCTTTCTA GTGGGCAGCG GCAGTTGTTG
GGCATTACCC GTGCGTTTGT GTTTAACCCT GCCTTGCTGA TCTTGGATGA AGCCACCAGC
TCGGTGGATA CCATCAGCGA ACGCTTGATC CAAAACGCCT TACAGGAGCT GATGGTCGGG
CGTACCGCCA TTGTGATTGC ACACCGGCTG AACACCATTA TTGGAGCAGA TCGTGTCATT
GTGATGCATG GGGGAGAGAT CATCCAGGGG GGCTCACACC AAACACTGGT CACTCAGCCT
GGGCTCTATC GTAAGTTGTG TGAACTGCAA TTTGGTTTAG ACGGCAGCCT ACCGACGCTC
CAGCAGGGTT AA
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| Protein sequence | MSPPPIEAVT EETRYGAFLD LHLLRRFFRY AKPHTRWVLL ALAILPLNTL IQLGQPLLLR
QAVDEHLIPG TLDGFAGLLV ALGVLLLLQA LAGYGMSVVN ATLGQRVVRD LRRDLFGHLL
RLDASYFNKH ASGRTTNRVT NDVEAVSQMV SAGLIHLIGD VVLLTGILIS MALLAPTLSL
TLVVALPLIV GGTLLAAKKS RLAQRENRLM LARMASRLTE EIEGQQEVRL FHRQQRNHAE
FEQQNQVYFT SSLVSNTWEA FQFSFIDALS TVVIAALFWI GASMSSADGV TIGTLVAFID
YVRRVFQPVR DLSGKFTTMQ AAMTALERIF GLLDSKPQIT DAQVNHAFTL PARPRLVMQE
VGFAYGEQPI LKNLSLTVEP GEQVAVVGPT GAGKSTLIKL LNRTYEPQQG IIQLGGQDLQ
NIPMATLRRT VGVVPQETFL FSGTIAENIH LRDPSIPQAA VEEAAHKTGA MAFIADLPEG
LNTRLTERGG NLSSGQRQLL GITRAFVFNP ALLILDEATS SVDTISERLI QNALQELMVG
RTAIVIAHRL NTIIGADRVI VMHGGEIIQG GSHQTLVTQP GLYRKLCELQ FGLDGSLPTL
QQG
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