Gene Mmc1_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1445 
Symbol 
ID4480621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1758364 
End bp1758810 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content56% 
IMG OID639722186 
Producthypothetical protein 
Protein accessionYP_865360 
Protein GI117924743 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0155103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.203788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGT TTGCTGATAT TGCCCCCCAT TGGGCGTGGG CGATTGTGGG GTTGGTGCTG 
ATTGGGCTGG AGATGTTTGT CTGGAGCACT TTTTTGCTGT GGATGGGTCT TTCGGCTTTT
GTAGTGGGGG CCATTTTTTA CGTTGCTCCA GATTTTCCTT GGGCGTGGTC GGTGGTGCTC
TATGGGGTTT TATCCCTGGT CGCCATCTAT TTGGGGCGCA AACTGTTTAA GCCTGCCCAA
GCGGATGACC CAGACGCCTT AAATGAGCGT GGTCAGCGCA TGGTGGGGCA GAGCTATGTG
GTGGCTGAAG CGATTGTGCA TGGCCGTGGC AAGGTGCGGG TGGGGGATTC CCTCTGGCTG
GCCCAGGGGG CGGATTGTCC AGCGGGTACG GTGGTCACGG TGACGTCGGT TAAAAGCACC
ACCCTTATGG TAACGTTAGC GGAGTAG
 
Protein sequence
MTLFADIAPH WAWAIVGLVL IGLEMFVWST FLLWMGLSAF VVGAIFYVAP DFPWAWSVVL 
YGVLSLVAIY LGRKLFKPAQ ADDPDALNER GQRMVGQSYV VAEAIVHGRG KVRVGDSLWL
AQGADCPAGT VVTVTSVKST TLMVTLAE