Gene Mmc1_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1438 
Symbol 
ID4480615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1749323 
End bp1749766 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content59% 
IMG OID639722181 
Producthypothetical protein 
Protein accessionYP_865355 
Protein GI117924738 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.317044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCAAG CCACCCTGCG CTTAGAGTCG CAGTGGCCCG CTTCCCCCGC CTTTGGTTGG 
GCGTTGGCGC CGCTGGAGGT CAGTGTACTG CTTAGCGATG ATGAGGCGGT GCAAGCCCTA
AATGCTCAAT ATCGGGGTAA GGATAAACCC ACCAATATTC TCTCCTTTGC CATGGAGGAG
GAGGCCGACG ACGCGATGCC CATGCCGATT ATGGCGGGGG AGCCACGGCT GTTGGGGGAT
CTTATCCTCG CGTATCAAAC GGTCCAGCGT GAGGCCGCTG AACAAGACAA ACCCTTTGAC
CAGCATCTCA CCCATCTTTT GGTGCATGGC ACCCTGCATC TGCTGGGCTA CGACCATGAG
CGTTCCGAGG ACGAAGCCCA GCAGCAAGAG GCGCGGGAGA TCGCTATCCT CGCCCAGTTG
GGTCTACCCA ACCCCTACCT TTAA
 
Protein sequence
MVQATLRLES QWPASPAFGW ALAPLEVSVL LSDDEAVQAL NAQYRGKDKP TNILSFAMEE 
EADDAMPMPI MAGEPRLLGD LILAYQTVQR EAAEQDKPFD QHLTHLLVHG TLHLLGYDHE
RSEDEAQQQE AREIAILAQL GLPNPYL