| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1436 |
|---|
| Symbol | |
|---|
| ID | 4480613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1745575 |
|---|
| End bp | 1746555 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639722179 |
|---|
| Product | PhoH family protein |
|---|
| Protein accession | YP_865353 |
|---|
| Protein GI | 117924736 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.384314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAA CTATCTGTGA GGATCGTCTG ACCTTTCCCG ATAATGGGCA CGCGATGGCG
CTGTTTGGGG ATGGTGATTC TCATTTGCGG CTGCTTGAAA AAGAGCTGGA GATTGCCATT
TTACCCCGGG GTAATGAGCT GCTGCTCAAA GGGCGCAAGC GGGATCTAAA AAAGGCCACG
GGGCTGCTTA ATGCGCTGTA TGAAAAGCTG TTGGCGGGGG AGGAGGTTCC CCTAAGCCGG
GTTTCTGATG GTCTGCGGGC GGTGCGCCAT GATGAGCCGG TGGAGCCGCT TTATAGTGGG
GATCTGGCCA TAAAAACCCC GCGTATAAGC GTCTATCCTC GCACCACGCG GCAGGCGCTT
TATGTGGAGG CGATGCGGCG CCACGAGATG ACCTTTGCCG TGGGGCCGGC GGGTACCGGT
AAAACCTTTT TGGCGGTCGC GGCAGCGGTT GAAGCGTGGC AAGAGAAGCT GGTTAAGCGC
ATTATCTTAA CCCGCCCGGC GGTGGAGGCC GGTGAAAACC TAGGCTTTTT GCCGGGGGAT
CTGCAAGCCA AGATCGACCC CTACCTGCGC CCGTTGTATG ATGCGTTATA TGCGATGGTG
GGCGCTGAGC GGGTGGAAAA GATGGTGGCT GCGGGAGAGT TGGAAATTGC CCCCTTGGCC
TATATGCGTG GTCGGACTCT GGGGGACGCT TTTATTATTT TGGATGAGGC GCAAAATACC
ACCCATGAAC AGATGAAGAT GTTTTTGACC CGCCTAGGAG AAAATGGCCG CATGGTGGTC
GCCGGTGACG AAACACAAAT TGATTTACCC CGTGGGCAGA ACTCTGGCTT TGTGCAAGCA
CTCAAAGTAC TCGGTGGGGT AGAGGGCATT CATTTTTCTC GGTTTACTGC GGATGATGTG
GTGCGGCACA CCCTGGTGGA GCGCATTGTC CGAGCCTATG ACAGCGCCAC TCCACGCCCC
CAAAACATGG GAAATTGGTG A
|
|---|
| Protein sequence | MSKTICEDRL TFPDNGHAMA LFGDGDSHLR LLEKELEIAI LPRGNELLLK GRKRDLKKAT
GLLNALYEKL LAGEEVPLSR VSDGLRAVRH DEPVEPLYSG DLAIKTPRIS VYPRTTRQAL
YVEAMRRHEM TFAVGPAGTG KTFLAVAAAV EAWQEKLVKR IILTRPAVEA GENLGFLPGD
LQAKIDPYLR PLYDALYAMV GAERVEKMVA AGELEIAPLA YMRGRTLGDA FIILDEAQNT
THEQMKMFLT RLGENGRMVV AGDETQIDLP RGQNSGFVQA LKVLGGVEGI HFSRFTADDV
VRHTLVERIV RAYDSATPRP QNMGNW
|
|---|
| |