Gene Mmc1_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1428 
Symbol 
ID4480657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1733558 
End bp1734292 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content48% 
IMG OID639722171 
Productglycosyl transferase family protein 
Protein accessionYP_865345 
Protein GI117924728 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCA ACATGCGTGA GCTAACTTCA TTAACCGTAA TCATGCCCTG TTATAATGAA 
GAGAATACCC TGGAAGAGGT GGTCAGTCAG GTCTTGCAAG CCAATATTTT AGGGTTGCAG
TTGGAGCTTA TCATCGTCAA CGATGGCTCG GTGGATGGTT CTCGACAGAT CATGGATCAG
TTGGCCGCGC AACATCCAGC CATTCGGGCG TTGCACCATG ATGTAAACCA AGGTAAAGGG
GCTGCATTGA GCACCGGGTT TAAGGCGGCA ACAGGGGATC TGGTGTTGAT ACAAGATGCC
GATCTGGAGT ATTCCCCCAA TGAGTACCCC TCCCTTTTGC AACCCTTTTT TGAACAGCGG
GCCGATGTGG TGTATGGTTC ACGCTTTCGT GGTGGGCATG GTTATGGGCG GGTTCTCTAT
TTTTGGCACA GTATGGGGAA TCGCTTTTTG ACCTTCTGTT CCAATGTGAT GACTGATATA
AATTTAACCG ACATGGAAAC CTGTTATAAG GTATTTCGCC GCCCCCTGTT GGAAAAAATT
CAATTGCGGG AAAAACGCTT TGGCGTGGAA CCTGAAATGA CCGCAAAATT GGCCCATTTA
CAGCCCCGTC CACGCATTTT TGAAGTGAGC ATCAGCTACT CGGGGCGTAC CTATGAAGAG
GGCAAAAAAA TCGGTTGGAA AGATGGGTTC CGGGCCATCT ACTGCATACT GCGCTATAAT
CTTATTCGAG ATTAA
 
Protein sequence
MAGNMRELTS LTVIMPCYNE ENTLEEVVSQ VLQANILGLQ LELIIVNDGS VDGSRQIMDQ 
LAAQHPAIRA LHHDVNQGKG AALSTGFKAA TGDLVLIQDA DLEYSPNEYP SLLQPFFEQR
ADVVYGSRFR GGHGYGRVLY FWHSMGNRFL TFCSNVMTDI NLTDMETCYK VFRRPLLEKI
QLREKRFGVE PEMTAKLAHL QPRPRIFEVS ISYSGRTYEE GKKIGWKDGF RAIYCILRYN
LIRD