Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1428 |
Symbol | |
ID | 4480657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1733558 |
End bp | 1734292 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639722171 |
Product | glycosyl transferase family protein |
Protein accession | YP_865345 |
Protein GI | 117924728 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGCA ACATGCGTGA GCTAACTTCA TTAACCGTAA TCATGCCCTG TTATAATGAA GAGAATACCC TGGAAGAGGT GGTCAGTCAG GTCTTGCAAG CCAATATTTT AGGGTTGCAG TTGGAGCTTA TCATCGTCAA CGATGGCTCG GTGGATGGTT CTCGACAGAT CATGGATCAG TTGGCCGCGC AACATCCAGC CATTCGGGCG TTGCACCATG ATGTAAACCA AGGTAAAGGG GCTGCATTGA GCACCGGGTT TAAGGCGGCA ACAGGGGATC TGGTGTTGAT ACAAGATGCC GATCTGGAGT ATTCCCCCAA TGAGTACCCC TCCCTTTTGC AACCCTTTTT TGAACAGCGG GCCGATGTGG TGTATGGTTC ACGCTTTCGT GGTGGGCATG GTTATGGGCG GGTTCTCTAT TTTTGGCACA GTATGGGGAA TCGCTTTTTG ACCTTCTGTT CCAATGTGAT GACTGATATA AATTTAACCG ACATGGAAAC CTGTTATAAG GTATTTCGCC GCCCCCTGTT GGAAAAAATT CAATTGCGGG AAAAACGCTT TGGCGTGGAA CCTGAAATGA CCGCAAAATT GGCCCATTTA CAGCCCCGTC CACGCATTTT TGAAGTGAGC ATCAGCTACT CGGGGCGTAC CTATGAAGAG GGCAAAAAAA TCGGTTGGAA AGATGGGTTC CGGGCCATCT ACTGCATACT GCGCTATAAT CTTATTCGAG ATTAA
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Protein sequence | MAGNMRELTS LTVIMPCYNE ENTLEEVVSQ VLQANILGLQ LELIIVNDGS VDGSRQIMDQ LAAQHPAIRA LHHDVNQGKG AALSTGFKAA TGDLVLIQDA DLEYSPNEYP SLLQPFFEQR ADVVYGSRFR GGHGYGRVLY FWHSMGNRFL TFCSNVMTDI NLTDMETCYK VFRRPLLEKI QLREKRFGVE PEMTAKLAHL QPRPRIFEVS ISYSGRTYEE GKKIGWKDGF RAIYCILRYN LIRD
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