| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1393 |
|---|
| Symbol | |
|---|
| ID | 4481812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1694297 |
|---|
| End bp | 1694800 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639722136 |
|---|
| Product | CMP/dCMP deaminase, zinc-binding |
|---|
| Protein accession | YP_865310 |
|---|
| Protein GI | 117924693 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2131] Deoxycytidylate deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGAC CCAGTTGGGA TATTCATTGG ATGCGCGTTG CCAAATTGGC GGCAGAGATG
AGCACCTGTG CATCGGGCCG GCGGGTTGGC GCGGTGTTTG TGCGGGATAA GCGGCTGCTT
GCCACCGGTT TTAATGGGGT GCCCAGTGGT TATCCACACC CCACCAGCTG TGCGCGGCGC
GAGGCTGGGG TGCCCAGCGG TCAGGGCTTG GGGTTATGTG TCTGCGCCCA TGCCGAGGCC
AATGGTATTG CCAATGCCGG GCGACACGGT ATTAAACTGG AGGGGTGTCG GGTCTATGTA
ACCACCCATC CCTGTGGTGC ATGCATGGGG GCGCTGGCGA ATATTGGGGT AAAAGAGGTC
TTTTATGCCG AGGCCTATGA TGATCCACGG GCTAAAGATA TTGCCGACTA TGCGGGCATT
GTCCTGCACC ATATCCAAGA TTGGCAAACA GCCGAGATGA CAACGCCAGA AGAGCTGACT
GAGGCCGGGT GCAAGCGTTG CTAA
|
|---|
| Protein sequence | MSRPSWDIHW MRVAKLAAEM STCASGRRVG AVFVRDKRLL ATGFNGVPSG YPHPTSCARR
EAGVPSGQGL GLCVCAHAEA NGIANAGRHG IKLEGCRVYV TTHPCGACMG ALANIGVKEV
FYAEAYDDPR AKDIADYAGI VLHHIQDWQT AEMTTPEELT EAGCKRC
|
|---|
| |