Gene Mmc1_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1373 
Symbol 
ID4482468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1666899 
End bp1667564 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content54% 
IMG OID639722116 
Producthypothetical protein 
Protein accessionYP_865290 
Protein GI117924673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000363846 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGCTTT GGGTTTTCGC GACGGCCAAT ACAGTCTTGT TTTGTGTGGG ACCTCGGACA 
CGGCAAATGG TCATGGATAT CCTGACCGAG GAATTCGCGG GCTGGCTGAT GAGCGACGGA
CTCATGAACT ACCGGACTTT TTCAAAGCGG TTGCGTTGCT GGGCACACCT GATCCGGAAG
GCCAAAGGGT TGTCGGTAAG CCTGGATAAA GATACCAAAC GATTCGGCTC CAGGGTATTG
GAAGTCCTAG AATACATGGT CGAAGAGGTC AAAGACGGAT CGGATCCGCC TGCTGCCGCG
TCGATTTTAG AAGATTTCCA GGGATACTGC GAAATATACA GAGATTATCC CCCGTCCGAG
AAGGTTCGCA GCCTTGCCGT TGAGCTTCTC AATGACTGGG ATGTCATCTG GCTACCCTTG
AGATCTCCGG GGTTGCCACT GACAAACAAT GATGCTGAAC GTGCGCTGCG CCACTGGGTC
ATCGCGCGTT TGATCAGCCA CGGAACTCGT ACGGCAGAAG GGAGCCAAGT ATTGGGTGTG
CTGGCTAGCG TCATCGAAAC TTGTCGATTG CGGAACGTGT CCCCCTGGGA CTATCTCGCT
AAGGTGATTG CTGAACGGAG AAAGGGAAAC CCCGTACCAC CGTTACCGGC TCCAGTAGCC
GCTTGA
 
Protein sequence
MWLWVFATAN TVLFCVGPRT RQMVMDILTE EFAGWLMSDG LMNYRTFSKR LRCWAHLIRK 
AKGLSVSLDK DTKRFGSRVL EVLEYMVEEV KDGSDPPAAA SILEDFQGYC EIYRDYPPSE
KVRSLAVELL NDWDVIWLPL RSPGLPLTNN DAERALRHWV IARLISHGTR TAEGSQVLGV
LASVIETCRL RNVSPWDYLA KVIAERRKGN PVPPLPAPVA A