Gene Mmc1_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1361 
Symbol 
ID4481833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1656197 
End bp1657018 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content44% 
IMG OID639722104 
Producthypothetical protein 
Protein accessionYP_865278 
Protein GI117924661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000844893 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAA ATAAACCATT GAAAATTATC CTAAGCAGCA TAGCGCTGAT TCTTTTTATG 
GGTGGCCCTT GGATCAATGA AGCCTTTCCT TTTTGGGGTA ACTTACTCAA AGGATCGCAA
GTTGCCTCAG AAACAGTTCG ATTAGGTTAT GTCAAAGGGG CATTATCTGA AGATCAGATT
ATCCATTTAA CTGAGATGAT TCAAAAAGCT GGAGATATCG CTAGTGTGCG TAGAAATGTA
GGCCGGATGA ATCTTCCACA AAAAGCAGTG CTGGATACGT TTATTCGAAT TGCTGTTAGA
CAAGGGAAAA TCCCTCGGAA GGAGGCAGAA ACTCTCTTGA GAAATTTGGG GGACGTGCCA
GGCTTTCGAA GTACTCTTGC CAAAACACTA GGGGTCAGCG CTGCCAAAAC CAAGGGGCAT
CTCAACGAGA TAAGGATTGC GAGTGCTGCG GTTGACAATG GTTTCAATGT AGTTCGGATT
GGCGGTCGTT TTGATGACGG GATTAAAGGG GGGGCAACTG ATATCGATAT CCTTCTTTCC
AGGGGCGATA AGCTTATTCC CATTGAAGCT AAAGCATACG ATGACATAGT TTTTTCCAGT
TTAGCTACCA TCCGTGGCGA TATGAACTCA CTGGTGGCTT TCAGAGGATC ATCTGACTTC
CCTGGGGCTA TTCATCCCAT TTTTAGTTTT ACGAATAGAC CCTCGAATTC TAATGTACTC
AGGGCAATTG ATAAGGAAAC TAAAAAACGT GGTATCCATG TCATCTACGG CTCTGCCCAA
GAGCAAACAA TGCAGTTGCA GCATCTAATG GATATCCTGT GA
 
Protein sequence
MDRNKPLKII LSSIALILFM GGPWINEAFP FWGNLLKGSQ VASETVRLGY VKGALSEDQI 
IHLTEMIQKA GDIASVRRNV GRMNLPQKAV LDTFIRIAVR QGKIPRKEAE TLLRNLGDVP
GFRSTLAKTL GVSAAKTKGH LNEIRIASAA VDNGFNVVRI GGRFDDGIKG GATDIDILLS
RGDKLIPIEA KAYDDIVFSS LATIRGDMNS LVAFRGSSDF PGAIHPIFSF TNRPSNSNVL
RAIDKETKKR GIHVIYGSAQ EQTMQLQHLM DIL