Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1361 |
Symbol | |
ID | 4481833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1656197 |
End bp | 1657018 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639722104 |
Product | hypothetical protein |
Protein accession | YP_865278 |
Protein GI | 117924661 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000844893 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAGAA ATAAACCATT GAAAATTATC CTAAGCAGCA TAGCGCTGAT TCTTTTTATG GGTGGCCCTT GGATCAATGA AGCCTTTCCT TTTTGGGGTA ACTTACTCAA AGGATCGCAA GTTGCCTCAG AAACAGTTCG ATTAGGTTAT GTCAAAGGGG CATTATCTGA AGATCAGATT ATCCATTTAA CTGAGATGAT TCAAAAAGCT GGAGATATCG CTAGTGTGCG TAGAAATGTA GGCCGGATGA ATCTTCCACA AAAAGCAGTG CTGGATACGT TTATTCGAAT TGCTGTTAGA CAAGGGAAAA TCCCTCGGAA GGAGGCAGAA ACTCTCTTGA GAAATTTGGG GGACGTGCCA GGCTTTCGAA GTACTCTTGC CAAAACACTA GGGGTCAGCG CTGCCAAAAC CAAGGGGCAT CTCAACGAGA TAAGGATTGC GAGTGCTGCG GTTGACAATG GTTTCAATGT AGTTCGGATT GGCGGTCGTT TTGATGACGG GATTAAAGGG GGGGCAACTG ATATCGATAT CCTTCTTTCC AGGGGCGATA AGCTTATTCC CATTGAAGCT AAAGCATACG ATGACATAGT TTTTTCCAGT TTAGCTACCA TCCGTGGCGA TATGAACTCA CTGGTGGCTT TCAGAGGATC ATCTGACTTC CCTGGGGCTA TTCATCCCAT TTTTAGTTTT ACGAATAGAC CCTCGAATTC TAATGTACTC AGGGCAATTG ATAAGGAAAC TAAAAAACGT GGTATCCATG TCATCTACGG CTCTGCCCAA GAGCAAACAA TGCAGTTGCA GCATCTAATG GATATCCTGT GA
|
Protein sequence | MDRNKPLKII LSSIALILFM GGPWINEAFP FWGNLLKGSQ VASETVRLGY VKGALSEDQI IHLTEMIQKA GDIASVRRNV GRMNLPQKAV LDTFIRIAVR QGKIPRKEAE TLLRNLGDVP GFRSTLAKTL GVSAAKTKGH LNEIRIASAA VDNGFNVVRI GGRFDDGIKG GATDIDILLS RGDKLIPIEA KAYDDIVFSS LATIRGDMNS LVAFRGSSDF PGAIHPIFSF TNRPSNSNVL RAIDKETKKR GIHVIYGSAQ EQTMQLQHLM DIL
|
| |