Gene Mmc1_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1281 
Symbol 
ID4480594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1571392 
End bp1572258 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content39% 
IMG OID639722024 
ProductDNA adenine methylase 
Protein accessionYP_865198 
Protein GI117924581 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.329872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.126066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCAC AAAAATCAAA TCAAACCTTA ATAAACATGC ATCCTAAGCC GTTCATAAAA 
TGGGCAGGAG GCAAACAGGC GCTCGCTCAA AAGTTGATCG ATTATTTCCC TGAAAAATTT
AATGTGTATT ACGAACCATT TCTTGGGGGG GGGAGTGTGT TTTTCTACAT CAGACCGAAG
AGCGCACTGT TGTCAGATTA CAATGAATGG CTTGTCAACA CATTTCAAGC GATACAAAAA
AACTGGGTGA CCGTCTATCA AAATCTTGTG GAAATCGAAA ACACAAAAGA AACATTCTTA
CATGTAAGAT CTATTGATCC ATTCAGTGTT GACTTGTTCA CGAGGGCTGC TTATTTTATT
TACCTGAACA AAACGTGCTT CCGCGGCTTG TTCAGGGTTA ATAAAAAAGG TGGATTTAAT
GTCCCATATG GAAGCTACCA ACGAAGATAT GCAGATCCAG ATAACTTACA TGCTGTTGCA
AATTCAATTC AAGGAGTGGA TATACAAGCA GTTGATTTTG AGATGGCACT TGGCAACACT
AAGAAAGGCG ATTTCGTTTA TCTTGATCCG CCATACTACA AATTTGGAGG GTATTCTGAT
TTTAATAGAT ACACTGACCA GCAATTTAAT GAAGGCGACC ATTATAGGTT GGCATCAGTA
TGTTATGAAC TTTCTCGGAA GGGAGTGTAT TGGGCTCAGA GCAACAGCAA TACGCCATTC
ATAAGGAGCC TCTATGCTGA AGACTCAATT ATCGAAATTC CTGCAAGAAG AGAAATAAAT
CTGAATTCAG GCGCGCGCAA TATAACAGAA TTGCTGATTA CAAACTACGA AGTTGCGAAT
AAAATGCAGA TCTCATTGTC AGAGTAG
 
Protein sequence
MRPQKSNQTL INMHPKPFIK WAGGKQALAQ KLIDYFPEKF NVYYEPFLGG GSVFFYIRPK 
SALLSDYNEW LVNTFQAIQK NWVTVYQNLV EIENTKETFL HVRSIDPFSV DLFTRAAYFI
YLNKTCFRGL FRVNKKGGFN VPYGSYQRRY ADPDNLHAVA NSIQGVDIQA VDFEMALGNT
KKGDFVYLDP PYYKFGGYSD FNRYTDQQFN EGDHYRLASV CYELSRKGVY WAQSNSNTPF
IRSLYAEDSI IEIPARREIN LNSGARNITE LLITNYEVAN KMQISLSE