Gene Mmc1_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1221 
Symbol 
ID4480827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1521163 
End bp1522422 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content58% 
IMG OID639721964 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_865138 
Protein GI117924521 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0324649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0695773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA TTCTCGTTCG CGGTGGCAAC ACCCTCAAAG GCACCATCCC CATCAGCGGC 
GCTAAAAACG CCTGCCTGCC AGAGCTGGCG GCTACCCTGC TGACAGAGGA TACCGTTACC
CTGCGTAATG TCCCCCATCT GCGCGATGTC ACCACCATGC TCGAACTACT CGGGCAACAT
GGTGCCGCCA TCACCATTGA TGAAAAACTT GGGGTTTCCA TCGACTGCAA ATCCATCCAA
AACACCATGG CCCCATATGA CTTGGTGCGT ACCATGCGCG CCTCCGTCCT GGTCATGGGT
CCCTTGGTCG CCCGCTGCGG TCATGCCGAA ATCTCCCTGC CCGGCGGCTG CGCCATCGGC
TCGCGCCCCA TCAATCTACA CCTACGCGGC CTCGAAATGA TGGGTGCCCA TGTCACCCTC
GAAGATGGCT ATGTGCGCAT TAAAGCAGGC CGCCTAAAAG GGGCACACAT CGTTTTTGAT
CTGGTCACCG TCACCGGCAC CGAAAACCTG CTCATGGCCG CGACCCTGGC CGATGGCATC
ACCATTCTCG ACAACGCCGC CGCCGAACCC GAAGTGGTGG ACCTGGCCAA CCTGCTCATG
GCGATGGGGG CCAAAATAGA CGGTGCCGGT ACCCGTACCA TCACCATCGA AGGGGTCAAA
AACCTACACG GAACGTCCCA CGATATCCTG CCCGACCGTA TCGAAACCGG CACCTTTATG
GTCGCCGCAG CGGTCACCGG TGGCGACATC ACCATGACCG GCACCTACCC CGCCCTGCTG
GAAGCCCATA TCGCCAAAAT GCGCGAAGCT GGCTGCCAAA TTGACGAGAT GGATCGAGCC
ATCCGCGTTC GTGCCGAAGC CGGAACCCTG CGTGCGGTGG ATATTACCAC CCTGCCCCAT
CCCGGTTTTC CCACCGATCT GCAAGCGCAA ATGATGGTGC TGCTCACCGT TGCTAAAGGG
GCCGCACAGA TCAAAGAGAC CATCTTTGAA AATCGCTTTA TGCATGTCTC CGAACTGCAA
CGCATGGGGG CCGATATCAC GGTTCAAGGC AATACCGCCA TCGTGCGTGG CGTGCCCCAA
CTGCGGGGTG CTCCGGTTAT GGCAACCGAT CTTCGGGCCT CTGCATCGCT GGTTTTGGCG
GGCCTCTGTG CCGAGGGCGA AACCCTTATC TCACGGGTCT ACCATATTGA TCGTGGTTAT
GAACGCATCG AAGAAAAGCT TAAAGCTTTG GGGGCAGATA TTCAGCGCCT GGGTCGGTAA
 
Protein sequence
MDKILVRGGN TLKGTIPISG AKNACLPELA ATLLTEDTVT LRNVPHLRDV TTMLELLGQH 
GAAITIDEKL GVSIDCKSIQ NTMAPYDLVR TMRASVLVMG PLVARCGHAE ISLPGGCAIG
SRPINLHLRG LEMMGAHVTL EDGYVRIKAG RLKGAHIVFD LVTVTGTENL LMAATLADGI
TILDNAAAEP EVVDLANLLM AMGAKIDGAG TRTITIEGVK NLHGTSHDIL PDRIETGTFM
VAAAVTGGDI TMTGTYPALL EAHIAKMREA GCQIDEMDRA IRVRAEAGTL RAVDITTLPH
PGFPTDLQAQ MMVLLTVAKG AAQIKETIFE NRFMHVSELQ RMGADITVQG NTAIVRGVPQ
LRGAPVMATD LRASASLVLA GLCAEGETLI SRVYHIDRGY ERIEEKLKAL GADIQRLGR