Gene Mmc1_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1218 
Symbol 
ID4480824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1518634 
End bp1519101 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content56% 
IMG OID639721961 
Productacetyltransferase 
Protein accessionYP_865135 
Protein GI117924518 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.065696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.121515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTG TCATTCGTTT AGCCACCCCT GAGGATTTAC CGGCAATGGT GGCACTGCTA 
CAGGTTCTGT TCGCGATTGA GGCAGATTTT CAAGCTGAGC CCGCACGGCA GCGACAGGGG
TTGGCCCTGC TATTGGAGAG TCCCGGTGCC TCGCTATGGG TTGCCGAGCA GCAGGGGCAA
GTAGTCGGGA TGTGCAGCTT ACAAAGTCTC TACTCCACTG CTGAGGGTGG TTTGGTTGGT
TTGGTAGAGG ATGTGGTGGT GGCCTCGGGC CATCAGGGGA AGGGCATCGG TGCCCGTTTA
CTCATGGCCT TGGAACAAGA GGCTCAAGCG CGGGCTATGG TACGTTTGCA ACTTTTGGCA
GATCGCAACA ACGTAGCAGC CTTGGGCTTT TATCAGCGTA TGGGGTGGCA AGGAACCCAA
CTGCTTGCCC TTCGTAAAGG GTTGCCCAGT GGTCAGATTG ACTCGTAA
 
Protein sequence
MSLVIRLATP EDLPAMVALL QVLFAIEADF QAEPARQRQG LALLLESPGA SLWVAEQQGQ 
VVGMCSLQSL YSTAEGGLVG LVEDVVVASG HQGKGIGARL LMALEQEAQA RAMVRLQLLA
DRNNVAALGF YQRMGWQGTQ LLALRKGLPS GQIDS