Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1194 |
Symbol | |
ID | 4480510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1488591 |
End bp | 1490000 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639721937 |
Product | nitrogenase molybdenum-iron cofactor biosynthesis protein NifN |
Protein accession | YP_865111 |
Protein GI | 117924494 |
COG category | [C] Energy production and conversion |
COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
TIGRFAM ID | [TIGR01285] nitrogenase molybdenum-iron cofactor biosynthesis protein NifN |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.620577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000992297 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCTAAGC TGATTAAGCG CAACAAGGCA CTCACCGTAG AGCCCGCCAA AGCCAGCCAG CCGGTTGGGG CGGCCTTGGC CTTTATGGGT ATCCGGGATG CCATTCCCAT GCTGCATGGC TCCCAGGGTT GCACGGCCTT TGCCAAGGTG TTTTTTGTGC GCCATTTCCG CGAGCCCATC CCCCTACAGA CCACCGCCAT GGATCAGGTA AGCACGGTGA TGGGGGGAGA TGAGAGCATC ACCGAAGGGC TGGATGTTTT AAGCGGTGGG GCCAAAACCC GGGTGGTGGG ATTGATCAGC ACCGGCTTGA CCGAGTGCCA GGGTGCGGAT ATTCACCGGG TTGTGCGGCA GTTTCGCGAC AGCCACCCCC AGCATGCCAA CAAGGAAGTG ATTGCGGTTA ATGCGGCGGA CTTTAAAGGG TGTCTGGAGA GCGGCTATGC CCATGCGGTG GGCAGCTTTA TCAAGGCATG GCTGCCCGAG CGGCCCGCCA CCAAGGGCGA CGCCAAACGG ATCAACCTAT TGGTGGGGCC GCACCTGACC CCGGGTGATC TGGAACGGCT GCTGGATACG GTGGAGCGCT TTGGTCTTAA AGCGGTTTTG CTCCCCGACC TCTCCCGTTC ACTGGATGGG CACTTGGCCC CGGACGATTT TTCACCCATC ACCACGGGTG GTGCCACGGT AGAAGATTTT CAAACCATCG GTGATGCCTG CGCCACCCTG GTGGTGGGCG ATATTATGAA TATCTGTGCC GACCTCATCC AAGAGCGCTG TGGATTGGCA GATTATCGCT TTTCTAGCCT TATGGGCATT GAAGCGTGGG ATCGGCTGTT GATGGTATTA ATGAACCTTT CGGGTCAACC GGTACCCGAG CGTTTTGGGC ATCAACGCCG CCAGTTGCAG GATGCCATGC TGGACACTCA CTTTTTCCTA AACCAGCGCA AGCTCGCTTT GGCGGGAGAC CCTGACTTTT TGAGCAACTG GTTGCCGCTC TTTCAAGAGA ATGGCTTGCA ACCGGTGGCG GTGGTGAGCC CGGTGGGCAC CGACTACCTG CAGAAGAGCC TCTACGAGAC CATTAAGATT GGGGATCTTG AGGATTTGCA GGACTTGGCG CGTGAAGCGG ACGCAGAGCT GTTTATTGGC AACAGCCATG TTGCCGCTCT GGCGCAACGT TTGGGGCGTC CCATCTTACG GGCGGGTTAT CCCTTATATG ACCAGATCGG CAGCCAATCC CGCTGCTGGA TTGGCTATAC AGGCAGCCGT CAGGCGCTGT TTGATCTGGC TAACCGGATG ATGCATCAAG AGGCGCATGG GCTTAAGCCC TACATCTCTC GCTATGCCCC AGCCAACGAC CAACCTCAGG AGAAGGACCA TCATGGCTGC GCTGCGGACA CGTCGGTTGC GGGTGGTTGA
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Protein sequence | MAKLIKRNKA LTVEPAKASQ PVGAALAFMG IRDAIPMLHG SQGCTAFAKV FFVRHFREPI PLQTTAMDQV STVMGGDESI TEGLDVLSGG AKTRVVGLIS TGLTECQGAD IHRVVRQFRD SHPQHANKEV IAVNAADFKG CLESGYAHAV GSFIKAWLPE RPATKGDAKR INLLVGPHLT PGDLERLLDT VERFGLKAVL LPDLSRSLDG HLAPDDFSPI TTGGATVEDF QTIGDACATL VVGDIMNICA DLIQERCGLA DYRFSSLMGI EAWDRLLMVL MNLSGQPVPE RFGHQRRQLQ DAMLDTHFFL NQRKLALAGD PDFLSNWLPL FQENGLQPVA VVSPVGTDYL QKSLYETIKI GDLEDLQDLA READAELFIG NSHVAALAQR LGRPILRAGY PLYDQIGSQS RCWIGYTGSR QALFDLANRM MHQEAHGLKP YISRYAPAND QPQEKDHHGC AADTSVAGG
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