Gene Mmc1_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1188 
Symbol 
ID4480504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1485118 
End bp1485492 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content50% 
IMG OID639721931 
Productferredoxin 
Protein accessionYP_865105 
Protein GI117924488 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000641343 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTAACA TTACCTTCAC CTCTCCTTCC ATGTCCCGCG ACAAGACGGT TTATGCGGTG 
GCTGGCCATA ACGGCACCCT GCTGGCGGTG GCGCAAAAAG AGGGGATTAA AATTCCTTTT
GATTGTCAGG ATGGTGAGTG TGGATCCTGC GTGTGTGAGG TCAAATTGTT AGAGCCCGGC
AAACAGCAAA AGGCCCATCA CCTGACGGAC AAAGAGAAGG AAATTTTGGT CTCTCTGGGT
AAAATCAGCA AAGCCGAGAT CGAAGCGGCT GAAGTGGGTG ATATTCCCCC CAAATACCGG
TTGGCTTGCC AGTTTATCGT GCGCGATGAA GATATTCTGG TAAGCTTTTC CGGAGAATCT
GGCGTAACCC TATGA
 
Protein sequence
MANITFTSPS MSRDKTVYAV AGHNGTLLAV AQKEGIKIPF DCQDGECGSC VCEVKLLEPG 
KQQKAHHLTD KEKEILVSLG KISKAEIEAA EVGDIPPKYR LACQFIVRDE DILVSFSGES
GVTL