Gene Mmc1_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1106 
Symbol 
ID4482243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1385728 
End bp1386186 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content54% 
IMG OID639721855 
Productcytochrome c, class II 
Protein accessionYP_865030 
Protein GI117924413 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00108735 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT TTAAGCTTTT GGGTGTGGCC ATGTTGGTGT CAGGCATGCT GAGCGCGGGT 
ATGGCCCAAG CGGCGGATGT GGATGCGGTG ATCCAGCAAC GTAAAGGGGT CATGGGTATC
ATTGGGGCGA ACATGGGCTT TATGGGCTGT ACCCTTAAGG GTGCGTGCGA TGCAGGCCCT
AAAGTGACCC TGAAACAGGC CCAAAGCTTG GCCTTTGCCG CTTCCATCTC GCTCGCGACC
TTTGCCGAGA ATGTGAAGGG TGCCTCTGTA AAGACGACCG CCAGTCCCAA AATTTGGGAC
GATTGGGCAA GCTATAAAAA GGGCATGCAG ATTATGGAAG AGCGAGCACT GGATCTGGTT
GACGCCGTTA AAAGTGGGGA TAAAGGGAGC ATGGGGGCGG CCATGAAAGG GTTGGGTGAA
ACCTGTAAAG GGTGTCACGA CAACTACCGC GAGAAGTAA
 
Protein sequence
MKQFKLLGVA MLVSGMLSAG MAQAADVDAV IQQRKGVMGI IGANMGFMGC TLKGACDAGP 
KVTLKQAQSL AFAASISLAT FAENVKGASV KTTASPKIWD DWASYKKGMQ IMEERALDLV
DAVKSGDKGS MGAAMKGLGE TCKGCHDNYR EK