Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1106 |
Symbol | |
ID | 4482243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1385728 |
End bp | 1386186 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639721855 |
Product | cytochrome c, class II |
Protein accession | YP_865030 |
Protein GI | 117924413 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00108735 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGT TTAAGCTTTT GGGTGTGGCC ATGTTGGTGT CAGGCATGCT GAGCGCGGGT ATGGCCCAAG CGGCGGATGT GGATGCGGTG ATCCAGCAAC GTAAAGGGGT CATGGGTATC ATTGGGGCGA ACATGGGCTT TATGGGCTGT ACCCTTAAGG GTGCGTGCGA TGCAGGCCCT AAAGTGACCC TGAAACAGGC CCAAAGCTTG GCCTTTGCCG CTTCCATCTC GCTCGCGACC TTTGCCGAGA ATGTGAAGGG TGCCTCTGTA AAGACGACCG CCAGTCCCAA AATTTGGGAC GATTGGGCAA GCTATAAAAA GGGCATGCAG ATTATGGAAG AGCGAGCACT GGATCTGGTT GACGCCGTTA AAAGTGGGGA TAAAGGGAGC ATGGGGGCGG CCATGAAAGG GTTGGGTGAA ACCTGTAAAG GGTGTCACGA CAACTACCGC GAGAAGTAA
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Protein sequence | MKQFKLLGVA MLVSGMLSAG MAQAADVDAV IQQRKGVMGI IGANMGFMGC TLKGACDAGP KVTLKQAQSL AFAASISLAT FAENVKGASV KTTASPKIWD DWASYKKGMQ IMEERALDLV DAVKSGDKGS MGAAMKGLGE TCKGCHDNYR EK
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