Gene Mmc1_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1086 
Symbol 
ID4482101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1330631 
End bp1331371 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content59% 
IMG OID639721835 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_865010 
Protein GI117924393 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.431982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTG GATTTTTTGA ACGTACCGCG ATCCTTATTC ACCAAGAGGG CATGGATAAA 
TTGGCCCAGT TGCATGTGCT GGTGTGTGGC CTGGGCGGCG TTGGCAGCTA TGCCGCCGAG
GCCCTCTGCC GGGCGGGTGT TGGGCACCTA ACCTTGGTGG AACACGATAC CATCGCCGCC
TCCAACATCA ACCGGCAACT GCATGCTACC CACGCTACTG TGGGCCAAAA AAAGATGCAG
GTGATGTTGC AGCGCATGCA GCAGATTAAT CCCCACGGCC AAATAGACCC CCTGGACCAG
TTTCTCACCC GCGAGCAGAT CCCTGATTTG TTAGAAACAG CCAAACCCCA TGTGGTGCTG
GATGCCATCG ACTCCCTAAA CTGCAAGGTG GGGCTAATTG TCGAGAGCTA CCACCGGGGC
ATCCCCGTCT TTAGCTCCAT GGGCGCGGGG GGGCGCTTGG ACCCCACCAA AGTACAGGTT
AGTGACCTTA TGCAGAGCCA CACCTGCCCC CTCGCCAGCA AAGTACGCCA GCGCTGTCGG
CGCGAAGGGG TGCGCAATGG GGTCATCTGC GCGTGGTCCA GTGAAATCCC CGCCCCGCCG
CTGCCGCCCG AACCGGTCAC ACAAGGACGC CCCAGAGCAG TCAATGGCAC CATCAGCTAT
CTACCAGCCC TGTTTGGGCT ATTACTGGCC GGACGAATGA TACACCAACA GCTAAATCCG
CTCGCCCCGC CAGCGCCATA G
 
Protein sequence
METGFFERTA ILIHQEGMDK LAQLHVLVCG LGGVGSYAAE ALCRAGVGHL TLVEHDTIAA 
SNINRQLHAT HATVGQKKMQ VMLQRMQQIN PHGQIDPLDQ FLTREQIPDL LETAKPHVVL
DAIDSLNCKV GLIVESYHRG IPVFSSMGAG GRLDPTKVQV SDLMQSHTCP LASKVRQRCR
REGVRNGVIC AWSSEIPAPP LPPEPVTQGR PRAVNGTISY LPALFGLLLA GRMIHQQLNP
LAPPAP