Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1077 |
Symbol | |
ID | 4481365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1316525 |
End bp | 1318228 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639721826 |
Product | ATPase central domain-containing protein |
Protein accession | YP_865001 |
Protein GI | 117924384 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0956592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGC TTGAGCTCGC CCGCCCCATC GCCACCGCAC TGGTTGAAAA GCATCCAGAG CTGCAACGCT ACCTGGAGCA GTTAAACATC TCTCATCGCA TGGTCATTGC CTATACAGAT CTCGCGCCAG CTCACCTGCG CACCTTGATT GCCCTTTATG GGCAAGAGAG CGGCGCGGAG GTGCGGGTGG CGCTGCTTGA GGCCCTACAA CAGGCCAGTG CTGGAGAGCG CTATCAAGCC GAACACTTTC CACAGCTTAT CCCGGATTTG GTGGCTTATC TTTGCCAGGG CAGCCAGCGG GGCTGGCTGT TTAAATTGGA CAACTCCGCG ACCCTACGCC CCTATCTGGT CACACGCATT GACTTTACCC CATCGGGTGG CGATGAAAAT GCCCGTTTGG TGGTGGAGCT CAAAGCCAAC TGTTGCGGCA AGCTTGCCCA TCCACAACTG ATCTTTAGCG AACGGGACAT CCCCGACCGC ACCCTACCAG AGCTCTTAGC AGACCGAGGA TTTGTAAAAG AGAGCCCCCC ATTGGTTGCG CTCTACGACC AACAGAGCCG CCAATATTTC GACTGGCGCA ACCGTTTTAA CGTACAATTT TCCGGGCGTG GTATTGGCCT CTATGCCGAA GACCCCAGCG CCACCCACCG CAATACGGAC TATGCGCGTA AAAATGTGGT GGTGCTCTCC ACCACCGACA GACCGGCCCG CTTGGTTAAT GACGAATCCA TCCTCACCGA CCGGGATCTT ACCCTGGAGT CCTCTGGGGC GATATTAAGC ACCCTACTCA AGCGTATTCA GCGCGAATCT GGCCTACCTC GTGAGATCGA CAACCGATTA ATAACCCTGG CCGAAGAGAT GCCCCCCAGC CTCTTTACCC AGCTGCCAGT GCATGCCTAT CTGTTTGTTT TTCATCTTGA GCTTCATCAC CATCTTTGGG TTCACATGGA TCATCTTAGC CTTTATTGTT ACCAACCTGA ACTTAAAGAA AAGCTCATTT TACCAGTCGA GCATGTGGAT TTAATCGACA TTCTCACCGC TGAGATGGAT CTCTTAATGG AAGATATTGT AGAGGGTAAA TCTGGCGGCA CTACGGTGCT CTGCTCGGGT CCTGCGGGGG TGGGCAAGAC CTTGACCGCA GAGGTCTACG CCGAGATCAT TCGACGCCCC CTTTACCGGG TGCACTCCGG TCAATTGGGG CTCAATGTGG CAGAGATGGA AAAGAGCTTA AAAGAGGTCT TAATTCGTGC CCAACGTTGG GGTGCGGTCA TGCTGATTGA CGAGGCCGAT GTCTACATTA AGCGGCGTGA TGATAACCTT ACCATGAACG CCGTGGTGGG GGTTTTTCTA CGGGTATTGG AATATTTTAA TGGTCTGCTG TTTTTAACCA CCAACCGAAG CCATGATATT GACGAGGCGA TTATCTCGCG CTGTATCGCC ATGATCCGCT TTCAGCCCCC TTCACGTCAG GAGCGGGTAC AGATTTGGTC GGTCATGGCC GAGCAGTTTG CCCTTCCCCT CTCGGTGCCG ATGCAGGAAC AGCTGGCGGA TTGTTATCCT CAAGCCACCG GGCGAGACAT TAAAGGCTTA ACCAAACTGG TGGCGAAATA TTGTGCCCAT CGCAGCACGT CACCCAGCTT GGCGGTCTTT GCCCACTGCG CCATCTTTCG GGGCATGGAT CTACCATCGG CACCGGCCTC TTAG
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Protein sequence | MAKLELARPI ATALVEKHPE LQRYLEQLNI SHRMVIAYTD LAPAHLRTLI ALYGQESGAE VRVALLEALQ QASAGERYQA EHFPQLIPDL VAYLCQGSQR GWLFKLDNSA TLRPYLVTRI DFTPSGGDEN ARLVVELKAN CCGKLAHPQL IFSERDIPDR TLPELLADRG FVKESPPLVA LYDQQSRQYF DWRNRFNVQF SGRGIGLYAE DPSATHRNTD YARKNVVVLS TTDRPARLVN DESILTDRDL TLESSGAILS TLLKRIQRES GLPREIDNRL ITLAEEMPPS LFTQLPVHAY LFVFHLELHH HLWVHMDHLS LYCYQPELKE KLILPVEHVD LIDILTAEMD LLMEDIVEGK SGGTTVLCSG PAGVGKTLTA EVYAEIIRRP LYRVHSGQLG LNVAEMEKSL KEVLIRAQRW GAVMLIDEAD VYIKRRDDNL TMNAVVGVFL RVLEYFNGLL FLTTNRSHDI DEAIISRCIA MIRFQPPSRQ ERVQIWSVMA EQFALPLSVP MQEQLADCYP QATGRDIKGL TKLVAKYCAH RSTSPSLAVF AHCAIFRGMD LPSAPAS
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